PAX2 (Taeniopygia guttata)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		ENSTGUG00000007620 T237507_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX2
M03294_2.00 		Homo sapiens
SGTCACGCWTSRNTGVNY
RNBCANYSAWGCGTGACS		 SELEX
Jolma et al.(2013)
PAX2_1 		0.987 0.987
PAX2
M05428_2.00 		Homo sapiens
NSGYYACGCNYSRNYRVNBN
NVNBYRNYSRNGCGTRRCSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX 		0.987 0.987
PAX2
M10808_2.00 		Homo sapiens
NNHNRTYAHKBRHDMBBNN
NNVVKHDYVMDWRAYNDNN		 Transfac
Matys et al.(2006)
V$PAX2_01 		0.987 0.987
PAX2
M10809_2.00 		Homo sapiens
NDSTTTNNN
NNNAAASHN		 Transfac
Matys et al.(2006)
V$PAX2_02 		0.987 0.987
PAX2
M10810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX2_Q2 		0.987 0.987
PAX2
M05429_2.00 		Homo sapiens
NSGTCACGCWTSANYGVNYN
NRNBCRNTSAWGCGTGACSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX 		0.987 0.987
Pax2
M02690_2.00 		Mus musculus
NRTCAYKB
VMRTGAYN		 SELEX
Mathelier et al.(2014)
MA0067.1 		0.981 0.981
PAX6
M00342_2.00 		Homo sapiens
NNNRCDMATTANNN
NNNTAATKHGYNNN		 PBM
Barrera et al.(2016)
PAX6_REF 		0.718 0.718
Pax6
M00540_2.00 		Mus musculus
CBAATTAA
TTAATTVG		 PBM
Berger et al.(2008)
Pax6_3838 		0.718 0.718
PAX6
M03291_2.00 		Homo sapiens
DTWYACGCWTGANTGMDYH
DRHKCANTCAWGCGTRWAH		 SELEX
Jolma et al.(2013)
PAX6_1 		0.718 0.718
PAX6
M05412_2.00 		Homo sapiens
NYACGCHYSRNYRMNYN
NRNKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX 		0.718 0.718
PAX6
M05414_2.00 		Homo sapiens
NYRCGCNYSRNYRVNYN
NRNBYRNYSRNGCGYRN		 SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX 		0.718 0.718
PAX6
M02689_2.00 		Homo sapiens
TTYACGCWTSANTK
MANTSAWGCGTRAA		 SELEX
Mathelier et al.(2014)
MA0069.1 		0.718 0.718
PAX6
M09216_2.00 		Homo sapiens
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C 		0.718 0.718
Pax6
M09217_2.00 		Mus musculus
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C 		0.718 0.718
PAX6
M10806_2.00 		Homo sapiens
NHNNTTYACGCWTSANTKVHH
DDBMANTSAWGCGTRAANNDN		 Transfac
Matys et al.(2006)
V$PAX6_01 		0.718 0.718
PAX6
M10807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX6_Q2 		0.718 0.718
PAX6
M00336_2.00 		Homo sapiens
RTGCACAC
GTGTGCAY		 PBM
Barrera et al.(2016)
PAX6_F258S 		0.718 0.718
PAX6
M00340_2.00 		Homo sapiens
NNNNNRN
NYNNNNN		 PBM
Barrera et al.(2016)
PAX6_R242T 		0.718 0.718
PAX6
M00344_2.00 		Homo sapiens
NNMSASGBYNNN
NNNRVCSTSKNN		 PBM
Barrera et al.(2016)
PAX6_V126D 		0.718 0.718
PAX6
M05413_2.00 		Homo sapiens
DYRCGCWTSRNYRMNYN
NRNKYRNYSAWGCGYRH		 SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX 		0.718 0.718
PAX6
M05415_2.00 		Homo sapiens
NYACGCHYSRNYRMHYN
NRDKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX 		0.718 0.718
PAX6
M00335_2.00 		Homo sapiens
BRNNNNNN
NNNNNNYV		 PBM
Barrera et al.(2016)
PAX6_A79E 		0.712 0.712
PAX6
M00337_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
PAX6_P118R 		0.712 0.712
PAX6
M00338_2.00 		Homo sapiens
WSGVRVDR
YHBYBCSW		 PBM
Barrera et al.(2016)
PAX6_P68S 		0.712 0.712
PAX6
M00339_2.00 		Homo sapiens
NNNNSGKVGGHNN
NNDCCBMCSNNNN		 PBM
Barrera et al.(2016)
PAX6_R128C 		0.712 0.712
PAX6
M00341_2.00 		Homo sapiens
BTSCCCSGSC
GSCSGGGSAV		 PBM
Barrera et al.(2016)
PAX6_R26G 		0.712 0.712
PAX6
M00343_2.00 		Homo sapiens
NNNNCCCVKCNBN
NVNGMBGGGNNNN		 PBM
Barrera et al.(2016)
PAX6_S119R 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000007853 Paired box 16 140
ENSTGUP00000007853 Homeodomain 251 281

Links

Other Homeodomain,Paired box family TFs
Other Taeniopygia guttata TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gfo_R002455 Geospiza fortis Gfo_R002455 I 1.000
PAX2 Monodelphis domestica ENSMODG00000019353 I 0.994
ENSMEUG00000013247 Macropus eugenii ENSMEUG00000013247 I 0.994
ENSFALG00000007308 Ficedula albicollis ENSFALG00000007308 I 0.994
ENSSHAG00000014328 Sarcophilus harrisii ENSSHAG00000014328 I 0.994
PAX2 Procavia capensis ENSPCAG00000006623 I 0.987
ENSPPYG00000002572 Pongo abelii ENSPPYG00000002572 I 0.987
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.987
PAX2 Pan troglodytes ENSPTRG00000002853 I 0.987
PAX2 Pteropus vampyrus ENSPVAG00000002148 I 0.987
ENSPANG00000021132 Papio anubis ENSPANG00000021132 I 0.987
PAX2 Ochotona princeps ENSOPRG00000007096 I 0.987
PAX2 Oryctolagus cuniculus ENSOCUG00000012860 I 0.987
Pax2 Mus musculus ENSMUSG00000004231 D 0.987
ENSAMEG00000017523 Ailuropoda melanoleuca ENSAMEG00000017523 I 0.987
PAX2 Gorilla gorilla ENSGGOG00000014908 I 0.987
PAX2 Macaca mulatta ENSMMUG00000009163 I 0.987
PAX2 Microcebus murinus ENSMICG00000001357 I 0.987
PAX2 Homo sapiens ENSG00000075891 D 0.987
PAX2 Cavia porcellus ENSCPOG00000000939 I 0.987
ENSP00000359319 Macaca fascicularis ENSP00000359319 I 0.987
PAX2 Callithrix jacchus ENSCJAG00000017397 I 0.987
PAX2 Canis familiaris ENSCAFG00000009709 I 0.987
Myotis_brandtii_PAX2_10025650 Myotis brandtii Myotis_brandtii_PAX2_10025650 I 0.987
PAX2 Bos taurus ENSBTAG00000021566 I 0.987
ENSP00000359319-D1 Bos grunniens ENSP00000359319-D1 I 0.987
PAX2 Dasypus novemcinctus ENSDNOG00000013328 I 0.987
PAX2 Felis catus ENSFCAG00000011602 I 0.987
PAX2 Otolemur garnettii ENSOGAG00000015274 I 0.987
PAX2 Sus scrofa ENSSSCG00000010556 I 0.987
PAX2 Erinaceus europaeus ENSEEUG00000001995 I 0.987
PAX2 Tursiops truncatus ENSTTRG00000015106 I 0.987
PAX2 Equus caballus ENSECAG00000021123 I 0.987
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.981
ENSMPUG00000016955 Mustela putorius furo ENSMPUG00000016955 I 0.981
pax2.L Xenopus laevis XB-GENE-486805 I 0.974
Pax2 Dipodomys ordii ENSDORG00000006193 I 0.974
PAX2 Echinops telfairi ENSETEG00000014765 I 0.968
ENSSTOG00000011575 Ictidomys tridecemlineatus ENSSTOG00000011575 I 0.968
ENSCSAG00000005568 Chlorocebus sabaeus ENSCSAG00000005568 I 0.968
PAX2 Myotis lucifugus ENSMLUG00000015106 I 0.968
CAA71206 Xenopus laevis CAA71206 I 0.968
Pvit_13858 Pogona vitticeps Pvit_13858 I 0.955
CAA04222 Xenopus laevis CAA04222 I 0.942
ENSLACG00000017470 Latimeria chalumnae ENSLACG00000017470 I 0.938
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.917
ENSAPLG00000014579 Anas platyrhynchos ENSAPLG00000014579 I 0.891
Sakowv30045649m.g Saccoglossus kowalevskii Sakowv30045649m.g I 0.814
fgenesh2_kg.scaffold_131000004 Branchiostoma floridae fgenesh2_kg.scaffold_131000004 I 0.772
ENSOARG00000015552 Ovis aries ENSOARG00000015552 I 0.762
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.724
pax6a Danio rerio ENSDARG00000103379 I 0.724
pax6.S Xenopus laevis XB-GENE-6464331 I 0.718
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.718
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.718
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.718
pax6b Danio rerio ENSDARG00000045936 I 0.718
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.718
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I 0.718
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.718
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I 0.712
AALB006643 Anopheles albimanus AALB006643 I 0.705