AT1G76880 (Arabidopsis thaliana)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 AT1G76880 T247879_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G76880
M06970_2.00		 Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G76880.1 MADF 78 146
AT1G76880.1 MADF 422 494

Links

Other MADF family TFs
Other Arabidopsis thaliana TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa003808mg Prunus persica PRUPE_ppa003808mg I 0.877
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.868
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.868
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.868
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.868
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.868
Bo6g083690 Brassica oleracea Bo6g083690 I 0.868
Bra003703 Brassica rapa Bra003703 I 0.867
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.856
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.856
Bo6g120870 Brassica oleracea Bo6g120870 I 0.856
Bra015716 Brassica rapa Bra015716 I 0.856
Bra008285 Brassica rapa Bra008285 I 0.854
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.852
TCM_035565 Theobroma cacao TCM_035565 I 0.849
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.848
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.848
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.844
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.843
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.843
Ca_25135 Cicer arietinum Ca_25135 I 0.841
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.838
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.837
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.836
MDP0000156139 Malus domestica MDP0000156139 I 0.836
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.836
mgf004276m Mimulus guttatus mgf004276m I 0.834
PK24122.1 Cannabis sativa PK24122.1 I 0.834
Ca_04386 Cicer arietinum Ca_04386 I 0.830
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.830
MDP0000451107 Malus domestica MDP0000451107 I 0.829
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.828
29576.m000223 Ricinus communis 29576.m000223 I 0.827
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.826
mgf021983m Mimulus guttatus mgf021983m I 0.825
Pm022572 Prunus mume Pm022572 I 0.824
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.824
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.823
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.822
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.822
F775_26337 Aegilops tauschii F775_26337 I 0.822
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.820
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.818
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.818
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.817
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.815
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.815
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.814
Cla001992 Citrullus lanatus Cla001992 I 0.814
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.814
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.814
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.814
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.812