MTR_6g035370 (Medicago truncatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MTR_6g035370 T249464_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.845 0.681
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.845 0.681
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.836 0.717
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH25861 MADF 70 140
KEH25861 MADF 478 550

Links

Other MADF family TFs
Other Medicago truncatula TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_25135 Cicer arietinum Ca_25135 I 0.969
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.961
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.959
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.959
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.959
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.958
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.958
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.958
Bo6g083690 Brassica oleracea Bo6g083690 I 0.958
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.958
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.958
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.958
Bra003703 Brassica rapa Bra003703 I 0.957
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.957
Bo6g120870 Brassica oleracea Bo6g120870 I 0.953
Bra015716 Brassica rapa Bra015716 I 0.953
Bra008285 Brassica rapa Bra008285 I 0.953
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.950
Ca_04386 Cicer arietinum Ca_04386 I 0.949
MDP0000156139 Malus domestica MDP0000156139 I 0.948
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.946
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.946
Pm022572 Prunus mume Pm022572 I 0.946
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.946
MDP0000451107 Malus domestica MDP0000451107 I 0.945
mgf021983m Mimulus guttatus mgf021983m I 0.944
PK24122.1 Cannabis sativa PK24122.1 I 0.944
TCM_035565 Theobroma cacao TCM_035565 I 0.943
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.942
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.942
Cla001992 Citrullus lanatus Cla001992 I 0.942
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.940
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.940
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.940
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.939
Ca_04385 Cicer arietinum Ca_04385 I 0.939
mgf018892m Mimulus guttatus mgf018892m N 0.938
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.935
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.935
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.934
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.934
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.934
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.934
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.932
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.932
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.932
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.931
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.931
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.930
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.930
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.930
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.928
29576.m000223 Ricinus communis 29576.m000223 I 0.928
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.927
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.927
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.926
30206.m000769 Ricinus communis 30206.m000769 I 0.925
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.923
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.923
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.922
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.921
TCM_001348 Theobroma cacao TCM_001348 I 0.920
TCM_035571 Theobroma cacao TCM_035571 I 0.918
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.918
Bo8g027460 Brassica oleracea Bo8g027460 I 0.917
Bra036731 Brassica rapa Bra036731 I 0.917
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.915
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.914
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.913
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.912
Cla007910 Citrullus lanatus Cla007910 I 0.910
Bo2g091240 Brassica oleracea Bo2g091240 I 0.910
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.907
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.907
Pm022570 Prunus mume Pm022570 I 0.904
PK26613.1 Cannabis sativa PK26613.1 I 0.899
mgf004276m Mimulus guttatus mgf004276m I 0.895
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.895
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.895
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.895
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.895
Bra003702 Brassica rapa Bra003702 I 0.894
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.890
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.889
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.889
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.888
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.888
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.888
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.886
MDP0000701272 Malus domestica MDP0000701272 I 0.885
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.885
OB04G27270 Oryza brachyantha OB04G27270 I 0.884
Cla005046 Citrullus lanatus Cla005046 I 0.883
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.882
F775_26337 Aegilops tauschii F775_26337 I 0.882
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.881
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.881
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.880
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.880
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.879
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.879
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.878
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.876
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.876
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.876
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.875
OBART04G20290 Oryza barthii OBART04G20290 I 0.874
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.874
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.874
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.874
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.874
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.874
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.874
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.874
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.872
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.872
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.872
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.872
TCM_015563 Theobroma cacao TCM_015563 I 0.871
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.870
OBART02G25970 Oryza barthii OBART02G25970 I 0.869
mgf015314m Mimulus guttatus mgf015314m N 0.869
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.869
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.868
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.868
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.868
Si012121m.g Setaria italica Si012121m.g I 0.868
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.868
MDP0000451038 Malus domestica MDP0000451038 I 0.867
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.866
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.866
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.866
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.866
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.866
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.866
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.866
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.865
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.865
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.865
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.865
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.864
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.863
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.863
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.861
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.859
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.859
30068.m002635 Ricinus communis 30068.m002635 I 0.859
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.859
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.858
OB02G33250 Oryza brachyantha OB02G33250 I 0.858
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.858
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.858
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.858
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.857
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.857
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.856
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.855
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.855
Si034382m.g Setaria italica Si034382m.g I 0.855
Pm024289 Prunus mume Pm024289 I 0.855
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.855
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.853
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.851
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.850
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.847
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.847
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.847
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.845
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.845
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.844
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.839
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.839
F775_24861 Aegilops tauschii F775_24861 N 0.838
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.838
Bra040010 Brassica rapa Bra040010 I 0.838
Bo6g049430 Brassica oleracea Bo6g049430 I 0.838
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.837
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.837
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.837
AT1G76880 Arabidopsis thaliana AT1G76880 D 0.836
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.834
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.830
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.825
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.825
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.823
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.822
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.821
Si016578m.g Setaria italica Si016578m.g I 0.818
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.816