PK26613.1 (Cannabis sativa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 PK26613.1 T251179_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.828 0.647
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.828 0.647
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK26613.1 MADF 141 212
PK26613.1 MADF 436 508

Links

Other MADF family TFs
Other Cannabis sativa TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla007910 Citrullus lanatus Cla007910 I 0.949
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.946
mgf021983m Mimulus guttatus mgf021983m I 0.935
Ca_04386 Cicer arietinum Ca_04386 I 0.932
29576.m000223 Ricinus communis 29576.m000223 I 0.931
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.930
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.930
mgf018892m Mimulus guttatus mgf018892m N 0.927
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.925
TCM_035565 Theobroma cacao TCM_035565 I 0.925
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.923
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.923
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.923
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.923
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.922
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.922
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.922
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.922
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.921
mgf015314m Mimulus guttatus mgf015314m N 0.920
30206.m000769 Ricinus communis 30206.m000769 I 0.920
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.919
TCM_001348 Theobroma cacao TCM_001348 I 0.919
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.918
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.918
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.918
PK24122.1 Cannabis sativa PK24122.1 I 0.917
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.917
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.917
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.917
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.916
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.916
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.916
Bra008285 Brassica rapa Bra008285 I 0.915
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.913
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.913
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.911
TCM_035571 Theobroma cacao TCM_035571 I 0.911
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.911
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.911
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.910
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.910
Bo6g120870 Brassica oleracea Bo6g120870 I 0.910
Bo6g083690 Brassica oleracea Bo6g083690 I 0.910
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.910
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.910
Bra003703 Brassica rapa Bra003703 I 0.910
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.910
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.910
Bra015716 Brassica rapa Bra015716 I 0.910
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.910
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.910
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.909
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.909
Bra003702 Brassica rapa Bra003702 I 0.907
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.905
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.905
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.904
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.903
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.902
Ca_25135 Cicer arietinum Ca_25135 I 0.902
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.902
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.901
Ca_04385 Cicer arietinum Ca_04385 I 0.901
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.900
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.900
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.900
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.899
Pm022570 Prunus mume Pm022570 I 0.898
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.897
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.897
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.895
Bo2g091240 Brassica oleracea Bo2g091240 I 0.892
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.892
Pm022572 Prunus mume Pm022572 I 0.892
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.889
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.888
MDP0000156139 Malus domestica MDP0000156139 I 0.887
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.886
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.886
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.886
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.882
Cla001992 Citrullus lanatus Cla001992 I 0.882
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.882
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.880
Bo8g027460 Brassica oleracea Bo8g027460 I 0.880
Bra036731 Brassica rapa Bra036731 I 0.880
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.879
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.878
MDP0000451107 Malus domestica MDP0000451107 I 0.878
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.877
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.876
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.874
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.874
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.873
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.872
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.871
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.871
OB04G27270 Oryza brachyantha OB04G27270 I 0.867
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.867
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.867
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.867
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.866
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.866
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.866
Pm001889 Prunus mume Pm001889 I 0.866
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.866
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.865
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.865
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.864
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.864
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.864
OBART04G20290 Oryza barthii OBART04G20290 I 0.862
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.862
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.862
OB02G33250 Oryza brachyantha OB02G33250 I 0.862
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.862
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.862
Si034382m.g Setaria italica Si034382m.g I 0.861
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.860
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.860
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.860
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.860
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.860
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.858
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.858
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.858
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.858
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.856
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.856
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.856
Si012121m.g Setaria italica Si012121m.g I 0.855
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.855
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.855
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.855
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.853
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.853
Si016578m.g Setaria italica Si016578m.g I 0.852
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.849
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.848
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.848
Pm024289 Prunus mume Pm024289 I 0.848
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.848
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.848
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.848
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.846
OBART02G25970 Oryza barthii OBART02G25970 I 0.846
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.846
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.844
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.844
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.844
TCM_015563 Theobroma cacao TCM_015563 I 0.843
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.843
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.842
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.842
F775_26337 Aegilops tauschii F775_26337 I 0.842
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.842
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.842
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.841
Cla005046 Citrullus lanatus Cla005046 I 0.840
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.839
MDP0000701272 Malus domestica MDP0000701272 I 0.838
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.837
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.836
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.836
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.835
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.833
Bra040010 Brassica rapa Bra040010 I 0.833
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.833
Bo6g049430 Brassica oleracea Bo6g049430 I 0.833
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.832
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.831
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.830
30068.m002635 Ricinus communis 30068.m002635 I 0.829
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.828
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.828
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.828
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.827
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.827
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.827
MDP0000451038 Malus domestica MDP0000451038 I 0.826
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.826
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.822
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.820
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.820
F775_24861 Aegilops tauschii F775_24861 N 0.814
mgf004276m Mimulus guttatus mgf004276m I 0.814
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.813
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.813