MDP0000451038 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000451038 T250777_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.909 0.818
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.909 0.818
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000451038 MADF 562 633
MDP0000451038 MADF 962 1032

Links

Other MADF family TFs
Other Malus domestica TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.968
Pm024289 Prunus mume Pm024289 I 0.966
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.966
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.966
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.965
TCM_015563 Theobroma cacao TCM_015563 I 0.964
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.962
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.962
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.962
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.962
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.961
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.961
Cla005046 Citrullus lanatus Cla005046 I 0.961
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.961
30068.m002635 Ricinus communis 30068.m002635 I 0.960
Si012121m.g Setaria italica Si012121m.g I 0.960
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.959
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.957
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.957
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.957
OB04G27270 Oryza brachyantha OB04G27270 I 0.957
MDP0000701272 Malus domestica MDP0000701272 I 0.957
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.957
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.957
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.957
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.956
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.956
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.955
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.955
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.955
F775_26337 Aegilops tauschii F775_26337 I 0.955
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.955
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.955
OBART04G20290 Oryza barthii OBART04G20290 I 0.955
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.955
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.953
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.953
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.953
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.952
Si034382m.g Setaria italica Si034382m.g I 0.949
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.949
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.947
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.947
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.946
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.945
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.945
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.945
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.943
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.943
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.943
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.943
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.943
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.943
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.942
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.942
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.940
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.940
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.940
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.940
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.938
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.938
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.938
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.936
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.936
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.933
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.932
mgf004276m Mimulus guttatus mgf004276m I 0.929
OB02G33250 Oryza brachyantha OB02G33250 I 0.927
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.926
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.924
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.924
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.924
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.924
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.924
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.924
OBART02G25970 Oryza barthii OBART02G25970 I 0.917
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.917
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.917
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.913
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.913
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.913
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.912
Bra040010 Brassica rapa Bra040010 I 0.912
Bo6g049430 Brassica oleracea Bo6g049430 I 0.912
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.909
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.909
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.909
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.908
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.907
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.907
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.905
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.904
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.904
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.904
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.902
Si016578m.g Setaria italica Si016578m.g I 0.899
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.899
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.899
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.898
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.896
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.892
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.892
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.892
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.892
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.892
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.889
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.888
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.888
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.887
29576.m000223 Ricinus communis 29576.m000223 I 0.886
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.886
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.886
Pm022570 Prunus mume Pm022570 I 0.886
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.885
MDP0000156139 Malus domestica MDP0000156139 I 0.885
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.885
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.883
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.883
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.883
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.882
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.882
TCM_035565 Theobroma cacao TCM_035565 I 0.881
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.881
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.881
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.881
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.880
MDP0000451107 Malus domestica MDP0000451107 I 0.880
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.879
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.879
Bo8g027460 Brassica oleracea Bo8g027460 I 0.879
Bra036731 Brassica rapa Bra036731 I 0.879
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.878
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.878
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.878
mgf018892m Mimulus guttatus mgf018892m N 0.876
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.875
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.875
30206.m000769 Ricinus communis 30206.m000769 I 0.875
PK24122.1 Cannabis sativa PK24122.1 I 0.875
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.874
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.874
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.874
TCM_035571 Theobroma cacao TCM_035571 I 0.874
Bo6g120870 Brassica oleracea Bo6g120870 I 0.874
Bra015716 Brassica rapa Bra015716 I 0.874
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.874
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.874
Bo6g083690 Brassica oleracea Bo6g083690 I 0.874
Pm022572 Prunus mume Pm022572 I 0.874
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.874
Cla007910 Citrullus lanatus Cla007910 I 0.873
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.873
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.873
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.873
Bra003703 Brassica rapa Bra003703 I 0.873
Ca_25135 Cicer arietinum Ca_25135 I 0.871
mgf021983m Mimulus guttatus mgf021983m I 0.871
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.870
TCM_001348 Theobroma cacao TCM_001348 I 0.869
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.869
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.869
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.869
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.867
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.866
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.866
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.865
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.865
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.865
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.865
Ca_04386 Cicer arietinum Ca_04386 I 0.865
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.865
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.865
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.864
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.864
Bra008285 Brassica rapa Bra008285 I 0.862
Ca_04385 Cicer arietinum Ca_04385 I 0.861
F775_24861 Aegilops tauschii F775_24861 N 0.860
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.859
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.858
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.854
Cla001992 Citrullus lanatus Cla001992 I 0.854
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.853
Pm001889 Prunus mume Pm001889 I 0.853
Bo2g091240 Brassica oleracea Bo2g091240 I 0.844
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.840
PK26613.1 Cannabis sativa PK26613.1 I 0.826
Bra003702 Brassica rapa Bra003702 I 0.824
mgf015314m Mimulus guttatus mgf015314m N 0.824
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.816
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.813
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.813