GSMUA_Achr1G04100_001 (Musa acuminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GSMUA_Achr1G04100_001 T249156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.834 0.763
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.834 0.763
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P04100_001 MADF 182 230
GSMUA_Achr1P04100_001 MADF 406 477

Links

Other MADF family TFs
Other Musa acuminata TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.967
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.966
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.960
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.960
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.952
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.949
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.933
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.909
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.907
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.907
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.904
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.904
F775_26337 Aegilops tauschii F775_26337 I 0.904
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.901
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.901
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.901
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.901
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.901
OB04G27270 Oryza brachyantha OB04G27270 I 0.901
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.901
OBART04G20290 Oryza barthii OBART04G20290 I 0.901
GSMUA_Achr2G00580_001 Musa acuminata GSMUA_Achr2G00580_001 N 0.901
Si012121m.g Setaria italica Si012121m.g I 0.900
MDP0000701272 Malus domestica MDP0000701272 I 0.899
TCM_015563 Theobroma cacao TCM_015563 I 0.899
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.899
MDP0000451038 Malus domestica MDP0000451038 I 0.899
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.897
Pm024289 Prunus mume Pm024289 I 0.896
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.896
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.896
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.895
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.894
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.894
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.894
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.894
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.893
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.891
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.891
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.891
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.891
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.889
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.889
30068.m002635 Ricinus communis 30068.m002635 I 0.888
Si034382m.g Setaria italica Si034382m.g I 0.885
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.884
OBART02G25970 Oryza barthii OBART02G25970 I 0.884
Cla005046 Citrullus lanatus Cla005046 I 0.882
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.881
OB02G33250 Oryza brachyantha OB02G33250 I 0.879
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.874
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.874
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.874
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.874
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.872
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.871
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.870
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.870
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.869
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.869
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.869
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.866
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.864
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.864
mgf004276m Mimulus guttatus mgf004276m I 0.862
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.861
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.859
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.859
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.859
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.859
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.859
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.858
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.858
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.858
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.855
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.853
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.853
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.853
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.852
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.851
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.850
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.850
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.846
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.843
Bra040010 Brassica rapa Bra040010 I 0.839
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.839
Bo6g049430 Brassica oleracea Bo6g049430 I 0.839
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.838
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.834
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.832
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.831
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.830
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.827
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.827
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.827
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.826
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.825
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.822
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.819
MDP0000156139 Malus domestica MDP0000156139 I 0.819
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.819
30206.m000769 Ricinus communis 30206.m000769 I 0.818
MDP0000451107 Malus domestica MDP0000451107 I 0.817
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.817
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.813
Pm022572 Prunus mume Pm022572 I 0.813
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.812