LPERR04G16420 (Leersia perrieri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 LPERR04G16420 T249357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.908 0.793
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.908 0.793
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR04G16420.1 MADF 107 178
LPERR04G16420.1 MADF 510 578

Links

Other MADF family TFs
Other Leersia perrieri TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.965
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.965
OB04G27270 Oryza brachyantha OB04G27270 I 0.965
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.965
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.964
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.963
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.963
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.963
OBART04G20290 Oryza barthii OBART04G20290 I 0.963
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.963
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.963
Si012121m.g Setaria italica Si012121m.g I 0.962
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.961
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.959
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.959
Pm024289 Prunus mume Pm024289 I 0.959
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.959
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.959
Si034382m.g Setaria italica Si034382m.g I 0.958
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.958
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.957
Cla005046 Citrullus lanatus Cla005046 I 0.957
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.957
MDP0000451038 Malus domestica MDP0000451038 I 0.957
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.957
MDP0000701272 Malus domestica MDP0000701272 I 0.956
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.956
F775_26337 Aegilops tauschii F775_26337 I 0.956
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.955
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.955
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.954
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.954
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.954
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.954
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.953
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.953
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.953
TCM_015563 Theobroma cacao TCM_015563 I 0.953
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.952
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.952
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.952
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.951
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.951
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.950
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.950
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.948
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.948
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.948
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.948
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.948
30068.m002635 Ricinus communis 30068.m002635 I 0.948
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.948
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.948
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.947
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.947
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.947
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.946
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.946
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.945
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.943
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.939
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.938
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.938
OB02G33250 Oryza brachyantha OB02G33250 I 0.935
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.935
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.934
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.933
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.933
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.932
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.932
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.932
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.932
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.931
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.927
mgf004276m Mimulus guttatus mgf004276m I 0.927
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.927
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.926
OBART02G25970 Oryza barthii OBART02G25970 I 0.926
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.925
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.925
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.923
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.920
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.916
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.916
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.914
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.913
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.912
Bra040010 Brassica rapa Bra040010 I 0.911
Bo6g049430 Brassica oleracea Bo6g049430 I 0.911
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.910
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.910
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.908
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.908
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.908
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.908
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.905
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.905
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.904
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.904
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.904
Si016578m.g Setaria italica Si016578m.g I 0.902
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.902
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.900
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.900
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.900
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.900
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.899
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.899
Bra008285 Brassica rapa Bra008285 I 0.898
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.898
Ca_04385 Cicer arietinum Ca_04385 I 0.898
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.897
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.897
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.896
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.896
Pm022572 Prunus mume Pm022572 I 0.895
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.895
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.894
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.893
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.893
MDP0000156139 Malus domestica MDP0000156139 I 0.892
mgf021983m Mimulus guttatus mgf021983m I 0.892
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.891
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.891
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.891
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.891
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.890
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.890
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.889
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.889
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.889
Bra003703 Brassica rapa Bra003703 I 0.889
Bo6g120870 Brassica oleracea Bo6g120870 I 0.889
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.889
Bo6g083690 Brassica oleracea Bo6g083690 I 0.889
Bra015716 Brassica rapa Bra015716 I 0.889
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.889
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.888
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.888
TCM_035565 Theobroma cacao TCM_035565 I 0.888
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.888
29576.m000223 Ricinus communis 29576.m000223 I 0.888
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.887
MDP0000451107 Malus domestica MDP0000451107 I 0.887
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.887
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.887
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.884
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.884
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.883
30206.m000769 Ricinus communis 30206.m000769 I 0.881
Pm022570 Prunus mume Pm022570 I 0.880
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.880
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.880
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.879
Ca_25135 Cicer arietinum Ca_25135 I 0.878
Bra036731 Brassica rapa Bra036731 I 0.878
Bo8g027460 Brassica oleracea Bo8g027460 I 0.878
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.877
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.877
Ca_04386 Cicer arietinum Ca_04386 I 0.877
PK26613.1 Cannabis sativa PK26613.1 I 0.876
TCM_035571 Theobroma cacao TCM_035571 I 0.875
Cla007910 Citrullus lanatus Cla007910 I 0.875
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.874
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.874
F775_24861 Aegilops tauschii F775_24861 N 0.873
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.873
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.873
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.873
mgf018892m Mimulus guttatus mgf018892m N 0.873
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.872
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.872
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.871
TCM_001348 Theobroma cacao TCM_001348 I 0.871
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.869
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.868
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.867
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.866
PK24122.1 Cannabis sativa PK24122.1 I 0.866
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.861
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.861
Bo2g091240 Brassica oleracea Bo2g091240 I 0.860
Pm001889 Prunus mume Pm001889 I 0.856
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.851
Cla001992 Citrullus lanatus Cla001992 I 0.851
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.849
Bra003702 Brassica rapa Bra003702 I 0.847
mgf015314m Mimulus guttatus mgf015314m N 0.828
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.824
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.816