MTR_1g098870 (Medicago truncatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MTR_1g098870 T249453_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.840 0.664
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.840 0.664
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES62363 MADF 71 140
AES62363 MADF 386 458

Links

Other MADF family TFs
Other Medicago truncatula TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_04385 Cicer arietinum Ca_04385 I 0.966
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.965
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.952
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.952
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.952
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.952
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.951
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.949
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.949
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.949
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.946
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.946
Bra008285 Brassica rapa Bra008285 I 0.943
TCM_035571 Theobroma cacao TCM_035571 I 0.942
Ca_25135 Cicer arietinum Ca_25135 I 0.942
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.942
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.941
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.940
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.940
TCM_035565 Theobroma cacao TCM_035565 I 0.939
MDP0000156139 Malus domestica MDP0000156139 I 0.939
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.938
Bra015716 Brassica rapa Bra015716 I 0.938
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.938
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.938
Bo6g120870 Brassica oleracea Bo6g120870 I 0.938
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.938
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.938
Bra003703 Brassica rapa Bra003703 I 0.938
Bo6g083690 Brassica oleracea Bo6g083690 I 0.938
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.938
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.937
Cla001992 Citrullus lanatus Cla001992 I 0.937
29576.m000223 Ricinus communis 29576.m000223 I 0.935
MDP0000451107 Malus domestica MDP0000451107 I 0.934
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.933
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.933
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.933
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.930
PK24122.1 Cannabis sativa PK24122.1 I 0.930
Pm022572 Prunus mume Pm022572 I 0.930
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.930
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.930
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.930
Ca_04386 Cicer arietinum Ca_04386 I 0.929
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.929
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.929
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.927
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.927
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.927
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.925
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.925
mgf021983m Mimulus guttatus mgf021983m I 0.924
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.923
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.923
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.922
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.920
30206.m000769 Ricinus communis 30206.m000769 I 0.920
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.919
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.918
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.914
mgf018892m Mimulus guttatus mgf018892m N 0.914
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.914
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.909
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.909
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.908
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.908
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.908
Pm022570 Prunus mume Pm022570 I 0.907
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.907
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.906
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.904
PK26613.1 Cannabis sativa PK26613.1 I 0.904
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.903
Bra036731 Brassica rapa Bra036731 I 0.903
Bo8g027460 Brassica oleracea Bo8g027460 I 0.903
TCM_001348 Theobroma cacao TCM_001348 I 0.902
Cla007910 Citrullus lanatus Cla007910 I 0.899
Bo2g091240 Brassica oleracea Bo2g091240 I 0.894
Bra003702 Brassica rapa Bra003702 I 0.887
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.887
F775_26337 Aegilops tauschii F775_26337 I 0.883
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.883
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.883
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.883
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.882
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.880
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.880
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.880
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.880
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.879
Si034382m.g Setaria italica Si034382m.g I 0.877
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.876
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.874
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.874
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.874
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.874
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.874
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.873
OB04G27270 Oryza brachyantha OB04G27270 I 0.873
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.873
MDP0000701272 Malus domestica MDP0000701272 I 0.872
mgf004276m Mimulus guttatus mgf004276m I 0.871
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.871
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.871
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.871
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.870
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.870
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.870
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.869
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.869
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.868
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.868
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.868
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.868
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.868
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.868
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.868
OBART04G20290 Oryza barthii OBART04G20290 I 0.868
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.866
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.866
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.866
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.866
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.866
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.866
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.865
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.865
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.864
Si012121m.g Setaria italica Si012121m.g I 0.863
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.863
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.863
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.862
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.862
Si016578m.g Setaria italica Si016578m.g I 0.862
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.862
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.862
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.861
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.860
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.860
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.859
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.859
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.859
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.857
OBART02G25970 Oryza barthii OBART02G25970 I 0.857
Cla005046 Citrullus lanatus Cla005046 I 0.857
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.855
Pm024289 Prunus mume Pm024289 I 0.855
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.855
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.855
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.854
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.854
MDP0000451038 Malus domestica MDP0000451038 I 0.853
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.851
mgf015314m Mimulus guttatus mgf015314m N 0.848
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.848
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.848
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.848
TCM_015563 Theobroma cacao TCM_015563 I 0.847
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.847
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.846
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.846
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.845
OB02G33250 Oryza brachyantha OB02G33250 I 0.845
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.845
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.845
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.845
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.845
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.844
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.844
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.842
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.842
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.842
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.840
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.840
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.839
F775_24861 Aegilops tauschii F775_24861 N 0.838
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.837
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.836
Bo6g049430 Brassica oleracea Bo6g049430 I 0.835
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.835
Bra040010 Brassica rapa Bra040010 I 0.835
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.833
30068.m002635 Ricinus communis 30068.m002635 I 0.833
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.830
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.819
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.816
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.815
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.813
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.813