MDP0000156139 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000156139 T250756_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.875 0.701
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.875 0.701
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.836 0.723
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000156139 MADF 178 247
MDP0000156139 MADF 575 648

Links

Other MADF family TFs
Other Malus domestica TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000451107 Malus domestica MDP0000451107 I 0.967
Pm022572 Prunus mume Pm022572 I 0.966
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.966
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.963
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.959
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.955
TCM_035565 Theobroma cacao TCM_035565 I 0.955
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.955
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.953
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.953
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.953
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.952
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.951
Ca_25135 Cicer arietinum Ca_25135 I 0.950
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.948
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.945
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.945
Cla001992 Citrullus lanatus Cla001992 I 0.945
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.945
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.945
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.945
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.945
Bo6g083690 Brassica oleracea Bo6g083690 I 0.945
Bra003703 Brassica rapa Bra003703 I 0.945
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.945
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.944
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.944
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.943
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.943
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.943
PK24122.1 Cannabis sativa PK24122.1 I 0.942
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.941
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.941
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.941
Ca_04386 Cicer arietinum Ca_04386 I 0.940
Bo6g120870 Brassica oleracea Bo6g120870 I 0.940
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.940
TCM_001348 Theobroma cacao TCM_001348 I 0.940
30206.m000769 Ricinus communis 30206.m000769 I 0.940
Bra015716 Brassica rapa Bra015716 I 0.940
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.939
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.939
Bra008285 Brassica rapa Bra008285 I 0.939
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.937
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.936
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.935
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.933
Ca_04385 Cicer arietinum Ca_04385 I 0.933
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.933
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.932
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.932
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.932
29576.m000223 Ricinus communis 29576.m000223 I 0.931
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.929
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.929
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.928
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.928
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.928
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.928
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.928
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.927
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.925
Pm022570 Prunus mume Pm022570 I 0.923
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.923
TCM_035571 Theobroma cacao TCM_035571 I 0.922
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.921
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.921
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.920
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.920
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.920
mgf021983m Mimulus guttatus mgf021983m I 0.919
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.919
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.916
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.914
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.914
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.914
Bo2g091240 Brassica oleracea Bo2g091240 I 0.913
Bo8g027460 Brassica oleracea Bo8g027460 I 0.912
Bra036731 Brassica rapa Bra036731 I 0.912
OB04G27270 Oryza brachyantha OB04G27270 I 0.910
F775_26337 Aegilops tauschii F775_26337 I 0.909
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.909
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.908
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.908
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.906
OBART04G20290 Oryza barthii OBART04G20290 I 0.906
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.906
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.906
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.906
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.906
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.906
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.906
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.905
mgf004276m Mimulus guttatus mgf004276m I 0.904
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.904
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.904
mgf018892m Mimulus guttatus mgf018892m N 0.903
MDP0000701272 Malus domestica MDP0000701272 I 0.901
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.901
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.901
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.901
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.901
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.901
TCM_015563 Theobroma cacao TCM_015563 I 0.900
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.900
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.899
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.898
Si012121m.g Setaria italica Si012121m.g I 0.897
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.897
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.897
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.897
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.896
Cla007910 Citrullus lanatus Cla007910 I 0.896
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.896
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.896
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.896
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.896
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.895
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.895
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.895
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.894
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.892
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.891
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.891
30068.m002635 Ricinus communis 30068.m002635 I 0.890
Cla005046 Citrullus lanatus Cla005046 I 0.889
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.889
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.888
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.888
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.888
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.887
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.887
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.887
PK26613.1 Cannabis sativa PK26613.1 I 0.887
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.887
Si034382m.g Setaria italica Si034382m.g I 0.887
Pm024289 Prunus mume Pm024289 I 0.887
MDP0000451038 Malus domestica MDP0000451038 I 0.885
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.884
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.884
OBART02G25970 Oryza barthii OBART02G25970 I 0.884
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.881
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.881
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.881
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.881
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.881
Bra003702 Brassica rapa Bra003702 I 0.880
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.880
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.879
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.879
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.879
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.879
OB02G33250 Oryza brachyantha OB02G33250 I 0.878
Bo6g049430 Brassica oleracea Bo6g049430 I 0.878
Bra040010 Brassica rapa Bra040010 I 0.878
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.875
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.875
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.875
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.874
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.874
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.874
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.874
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.874
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.874
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.874
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.873
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.873
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.873
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.873
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.872
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.871
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.870
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.869
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.867
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.863
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.861
Si016578m.g Setaria italica Si016578m.g I 0.860
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.860
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.860
F775_24861 Aegilops tauschii F775_24861 N 0.857
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.849
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.849
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.847
mgf015314m Mimulus guttatus mgf015314m N 0.844
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.836
AT1G76880 Arabidopsis thaliana AT1G76880 D 0.836
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.833
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.830
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.830
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.828
Pm001889 Prunus mume Pm001889 I 0.823
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.819
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.818
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.818
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.818
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.814