MDP0000301451 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000301451 T250771_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.936 0.708
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.936 0.708
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000301451 MADF 47 127

Links

Other MADF family TFs
Other Malus domestica TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.967
PK27986.1 Cannabis sativa PK27986.1 I 0.965
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.962
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.959
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.959
TCM_029695 Theobroma cacao TCM_029695 I 0.955
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.955
Ca_00394 Cicer arietinum Ca_00394 I 0.955
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.955
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.955
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.953
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.946
SapurV1A.0045s0480 Salix purpurea SapurV1A.0045s0480 I 0.941
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.939
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.936
Bo6g075950 Brassica oleracea Bo6g075950 I 0.936
Bra003346 Brassica rapa Bra003346 I 0.936
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.936
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.936
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.935
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.934
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.931
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.931
Cla009854 Citrullus lanatus Cla009854 I 0.930
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.930
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.930
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.917
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.917
Solyc02g076810.2 Solanum lycopersicum Solyc02g076810.2 I 0.911
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.910
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.907
Bra007407 Brassica rapa Bra007407 I 0.906
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.906
29900.m001628 Ricinus communis 29900.m001628 I 0.903
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.903
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.902
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.901
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.901
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.895
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.894
PGSC0003DMG400010197 Solanum tuberosum PGSC0003DMG400010197 I 0.891
Ca_19877 Cicer arietinum Ca_19877 I 0.890
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.888
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.887
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.886
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.873
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.873
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.867
mgf006505m Mimulus guttatus mgf006505m I 0.863
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.859
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.859
Cla019967 Citrullus lanatus Cla019967 I 0.859
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.854
OS05G0560600 Oryza sativa OS05G0560600 I 0.854
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.854
OBART05G25610 Oryza barthii OBART05G25610 I 0.854
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.854
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.854
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.854
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.854
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.854
mgf000047m Mimulus guttatus mgf000047m I 0.853
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.846
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.840
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.840
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.840
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.840
Si022565m.g Setaria italica Si022565m.g I 0.840
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.840
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.840
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.840
Cla002288 Citrullus lanatus Cla002288 I 0.829
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.828
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.826
PGSC0003DMG400020421 Solanum tuberosum PGSC0003DMG400020421 N 0.822
TCM_042467 Theobroma cacao TCM_042467 N 0.820
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.818
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.815
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.815