Bra022637 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra022637 T267947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022637.1-P Myb 1 42

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g046050 Brassica oleracea Bo2g046050 N 0.874
Bo3g022870 Brassica oleracea Bo3g022870 N 0.823
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.823
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.823
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.823
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.823
TRY Arabidopsis thaliana AT5G53200 N 0.823
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.823
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.807
Bo9g110930 Brassica oleracea Bo9g110930 N 0.801
29742.m001447 Ricinus communis 29742.m001447 N 0.799
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.787
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N 0.787
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.771
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.761
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.761
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.761
MDP0000141474 Malus domestica MDP0000141474 N 0.756
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.751
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.749
Cucsa.201970 Cucumis sativus Cucsa.201970 N 0.748
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.747
TCM_005177 Theobroma cacao TCM_005177 N 0.747
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.747
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.747
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.747
Ca_15029 Cicer arietinum Ca_15029 N 0.747
Carubv10024406m.g Capsella rubella Carubv10024406m.g N 0.747
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.747
Bra039283 Brassica rapa Bra039283 N 0.747
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N 0.747
Bra004539 Brassica rapa Bra004539 N 0.747
Bo4g197120 Brassica oleracea Bo4g197120 N 0.747
CPC Arabidopsis thaliana AT2G46410 N 0.747
Bo4g009260 Brassica oleracea Bo4g009260 N 0.747
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N 0.747
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N 0.747
Bo3g039260 Brassica oleracea Bo3g039260 N 0.747
GSMUA_Achr3G25090_001 Musa acuminata GSMUA_Achr3G25090_001 N 0.747
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.747
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N 0.745
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.739
Cagra.0483s0079 Capsella grandiflora Cagra.0483s0079 N 0.734
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.732
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.732
CPC Arabidopsis lyrata Al_scaffold_0005_3105 N 0.728
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.727
MDP0000583070 Malus domestica MDP0000583070 N 0.725
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.725
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.725
Pm018400 Prunus mume Pm018400 N 0.725
Bra026297 Brassica rapa Bra026297 N 0.723
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.723
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N 0.721
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.721
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.718
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.713
Carubv10018233m.g Capsella rubella Carubv10018233m.g N 0.713
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.712
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.712
TCM_016428 Theobroma cacao TCM_016428 N 0.710
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.703
GSMUA_Achr1G05080_001 Musa acuminata GSMUA_Achr1G05080_001 N 0.700
Pm019781 Prunus mume Pm019781 N 0.694
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N 0.694
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.692
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N 0.690
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N 0.690
GSMUA_Achr5G09460_001 Musa acuminata GSMUA_Achr5G09460_001 N 0.689
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N 0.686
TCL1 Arabidopsis thaliana AT2G30432 N 0.686
Bostr.13158s0169 Boechera stricta Bostr.13158s0169 N 0.685
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.683
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.683
Carubv10025583m.g Capsella rubella Carubv10025583m.g N 0.682
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.682
TCM_015351 Theobroma cacao TCM_015351 N 0.674
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N 0.668
Carubv10024393m.g Capsella rubella Carubv10024393m.g N 0.668
Cla011563 Citrullus lanatus Cla011563 N 0.665
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.664
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.664
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.664
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.664
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.664
Bostr.24513s0196 Boechera stricta Bostr.24513s0196 N 0.661