CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10005949.g
(
Linum usitatissimum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Lus10005949.g
T287896_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10005949
Myb
45
87
EMSEAEVDLIHRMHKLLGDRWDLIAGRIPGRKAEEIERFWIMR
Links
Other
Myb/SANT
family TFs
Other
Linum usitatissimum
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_5g009460
Medicago truncatula
MTR_5g009460
N
0.868
Ca_15029
Cicer arietinum
Ca_15029
N
0.868
Ciclev10006315m.g
Citrus clementina
Ciclev10006315m.g
N
0.865
Eucgr.E00069
Eucalyptus grandis
Eucgr.E00069
N
0.837
Ciclev10024111m.g
Citrus clementina
Ciclev10024111m.g
N
0.837
TCM_005177
Theobroma cacao
TCM_005177
N
0.837
Gorai.007G107400
Gossypium raimondii
Gorai.007G107400
N
0.837
cassava32987.m1
Manihot esculenta
cassava32987.m1
N
0.837
orange1.1g034546m.g
Citrus sinensis
orange1.1g034546m.g
N
0.837
SapurV1A.0013s0580
Salix purpurea
SapurV1A.0013s0580
N
0.836
POPTR_0002s17030
Populus trichocarpa
POPTR_0002s17030
N
0.833
SapurV1A.2893s0010
Salix purpurea
SapurV1A.2893s0010
N
0.824
SapurV1A.2295s0020
Salix purpurea
SapurV1A.2295s0020
N
0.824
SapurV1A.0190s0070
Salix purpurea
SapurV1A.0190s0070
N
0.824
PGSC0003DMG400000212
Solanum tuberosum
PGSC0003DMG400000212
N
0.822
Solyc01g095640.1
Solanum lycopersicum
Solyc01g095640.1
N
0.822
GLYMA01G43435
Glycine max
GLYMA01G43435
N
0.822
VIT_15s0046g01130
Vitis vinifera
VIT_15s0046g01130
N
0.817
POPTR_0014s09200
Populus trichocarpa
POPTR_0014s09200
N
0.815
PRUPE_ppa023853mg
Prunus persica
PRUPE_ppa023853mg
N
0.814
MDP0000141474
Malus domestica
MDP0000141474
N
0.814
Pm018400
Prunus mume
Pm018400
N
0.814
GLYMA11G02061
Glycine max
GLYMA11G02061
N
0.810
Bo9g110930
Brassica oleracea
Bo9g110930
N
0.810
gene19217-v1.0-hybrid
Fragaria vesca
gene19217-v1.0-hybrid
N
0.804
MDP0000583070
Malus domestica
MDP0000583070
N
0.804
cassava46504.m1
Manihot esculenta
cassava46504.m1
N
0.803
VIT_16s0050g02530
Vitis vinifera
VIT_16s0050g02530
N
0.803
evm.TU.supercontig_3.55
Carica papaya
evm.TU.supercontig_3.55
N
0.802
Cla011563
Citrullus lanatus
Cla011563
N
0.802
Gorai.001G155700
Gossypium raimondii
Gorai.001G155700
N
0.801
TCM_016428
Theobroma cacao
TCM_016428
N
0.798
Cagra.0084s0067
Capsella grandiflora
Cagra.0084s0067
N
0.788
Bo3g022870
Brassica oleracea
Bo3g022870
N
0.788
Carubv10027412m.g
Capsella rubella
Carubv10027412m.g
N
0.788
Thhalv10015741m.g
Eutrema salsugineum
Thhalv10015741m.g
N
0.788
Bostr.26833s0960
Boechera stricta
Bostr.26833s0960
N
0.788
TRY
Arabidopsis thaliana
AT5G53200
N
0.788
TRY
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8001350
N
0.788
Cucsa.201970
Cucumis sativus
Cucsa.201970
N
0.786
Bostr.7365s0058
Boechera stricta
Bostr.7365s0058
N
0.784
Cagra.1372s0017
Capsella grandiflora
Cagra.1372s0017
N
0.784
Carubv10003403m.g
Capsella rubella
Carubv10003403m.g
N
0.784
Aquca_037_00095
Aquilegia coerulea
Aquca_037_00095
N
0.784
GSMUA_Achr8G19880_001
Musa acuminata
GSMUA_Achr8G19880_001
N
0.783
GSMUA_AchrUn_randomG19730_001
Musa acuminata
GSMUA_AchrUn_randomG19730_001
N
0.783
scaffold_401530.1
Arabidopsis lyrata
scaffold_401530.1
N
0.782
Carubv10024393m.g
Capsella rubella
Carubv10024393m.g
N
0.780
TCM_015351
Theobroma cacao
TCM_015351
N
0.776
POPTR_0015s02310
Populus trichocarpa
POPTR_0015s02310
N
0.776
29742.m001447
Ricinus communis
29742.m001447
N
0.771
Eucgr.D02360
Eucalyptus grandis
Eucgr.D02360
N
0.767
Thhalv10029104m.g
Eutrema salsugineum
Thhalv10029104m.g
N
0.763
Aquca_013_00134
Aquilegia coerulea
Aquca_013_00134
N
0.760
Cagra.0567s0009
Capsella grandiflora
Cagra.0567s0009
N
0.760
Al_scaffold_0136_3
Arabidopsis lyrata
Al_scaffold_0136_3
N
0.760
SapurV1A.1227s0050
Salix purpurea
SapurV1A.1227s0050
N
0.754
POPTR_0012s01420
Populus trichocarpa
POPTR_0012s01420
N
0.754
SapurV1A.0377s0050
Salix purpurea
SapurV1A.0377s0050
N
0.754
SapurV1A.0346s0010
Salix purpurea
SapurV1A.0346s0010
N
0.754
Lus10038822.g
Linum usitatissimum
Lus10038822.g
N
0.752
Carubv10025583m.g
Capsella rubella
Carubv10025583m.g
N
0.752
Carubv10024964m.g
Capsella rubella
Carubv10024964m.g
N
0.750
Bra026297
Brassica rapa
Bra026297
N
0.749
evm.TU.contig_29502
Carica papaya
evm.TU.contig_29502
N
0.748
TCL1
Arabidopsis lyrata
fgenesh2_kg.4__1015__AT2G30432.1
N
0.746
TCL1
Arabidopsis thaliana
AT2G30432
N
0.746
PDK_20s1307674g001
Phoenix dactylifera
PDK_20s1307674g001
N
0.745
ETC3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002892
N
0.744
ETC3
Arabidopsis thaliana
AT4G01060
N
0.744
Bra008539
Brassica rapa
Bra008539
N
0.744
Bo2g098940
Brassica oleracea
Bo2g098940
N
0.744
Bo2g046050
Brassica oleracea
Bo2g046050
N
0.743
Bra022637
Brassica rapa
Bra022637
N
0.739
MTR_2g088730
Medicago truncatula
MTR_2g088730
N
0.738
GSMUA_Achr1G05080_001
Musa acuminata
GSMUA_Achr1G05080_001
N
0.738
TCL2
Arabidopsis thaliana
AT2G30424
N
0.736
TCL2
Arabidopsis lyrata
scaffold_401531.1
N
0.736
MDP0000547418
Malus domestica
MDP0000547418
N
0.734
MDP0000718806
Malus domestica
MDP0000718806
N
0.734
Bo4g197120
Brassica oleracea
Bo4g197120
N
0.733
Bra004539
Brassica rapa
Bra004539
N
0.733
Thhalv10001695m.g
Eutrema salsugineum
Thhalv10001695m.g
N
0.733
Carubv10024406m.g
Capsella rubella
Carubv10024406m.g
N
0.733
Bra039283
Brassica rapa
Bra039283
N
0.733
Cagra.0050s0058
Capsella grandiflora
Cagra.0050s0058
N
0.733
Bo4g009260
Brassica oleracea
Bo4g009260
N
0.733
Bo3g039260
Brassica oleracea
Bo3g039260
N
0.733
CPC
Arabidopsis thaliana
AT2G46410
N
0.733
Bostr.25993s0128
Boechera stricta
Bostr.25993s0128
N
0.733
Bostr.24513s0196
Boechera stricta
Bostr.24513s0196
N
0.731
Bostr.24513s0195
Boechera stricta
Bostr.24513s0195
N
0.729
30169.m006531
Ricinus communis
30169.m006531
N
0.727
Eucgr.K00332
Eucalyptus grandis
Eucgr.K00332
N
0.723
Bo3g054440
Brassica oleracea
Bo3g054440
N
0.722
Bra000941
Brassica rapa
Bra000941
N
0.722
PDK_20s1335581g001
Phoenix dactylifera
PDK_20s1335581g001
N
0.721
CPC
Arabidopsis lyrata
Al_scaffold_0005_3105
N
0.715
Bostr.13158s0169
Boechera stricta
Bostr.13158s0169
N
0.715
Cagra.0483s0079
Capsella grandiflora
Cagra.0483s0079
N
0.715
Eucgr.E00851
Eucalyptus grandis
Eucgr.E00851
N
0.712
cassava10382.m1
Manihot esculenta
cassava10382.m1
N
0.705
VIT_10s0116g01760
Vitis vinifera
VIT_10s0116g01760
N
0.703
Lus10014933.g
Linum usitatissimum
Lus10014933.g
N
0.702
gene35171-v1.0-hybrid
Fragaria vesca
gene35171-v1.0-hybrid
N
0.698
ETC1
Arabidopsis lyrata
Al_scaffold_0001_92
N
0.695
Carubv10011382m.g
Capsella rubella
Carubv10011382m.g
N
0.695
Cagra.1968s0081
Capsella grandiflora
Cagra.1968s0081
N
0.695
Bostr.5325s0057
Boechera stricta
Bostr.5325s0057
N
0.695
ETC1
Arabidopsis thaliana
AT1G01380
N
0.695
Carubv10018233m.g
Capsella rubella
Carubv10018233m.g
N
0.693
TCM_030224
Theobroma cacao
TCM_030224
N
0.691
GSMUA_Achr3G25090_001
Musa acuminata
GSMUA_Achr3G25090_001
N
0.691
OPUNC01G23150
Oryza punctata
OPUNC01G23150
N
0.682
PRUPE_ppa024794mg
Prunus persica
PRUPE_ppa024794mg
N
0.682
Pm019781
Prunus mume
Pm019781
N
0.680
Aquca_028_00182
Aquilegia coerulea
Aquca_028_00182
N
0.679
SapurV1A.0722s0160
Salix purpurea
SapurV1A.0722s0160
N
0.677
TRIUR3_10842
Triticum urartu
TRIUR3_10842
N
0.668
TRAES3BF020200120CFD_g
Triticum aestivum
TRAES3BF020200120CFD_g
N
0.668
Traes_3DL_30CF35BB3
Triticum aestivum
Traes_3DL_30CF35BB3
N
0.668
ETC2
Arabidopsis thaliana
AT2G30420
N
0.667
Eucgr.A01720
Eucalyptus grandis
Eucgr.A01720
N
0.667
SapurV1A.0928s0060
Salix purpurea
SapurV1A.0928s0060
N
0.663
SapurV1A.1106s0040
Salix purpurea
SapurV1A.1106s0040
N
0.663
POPTR_0007s02510
Populus trichocarpa
POPTR_0007s02510
N
0.663
GLYMA12G32130
Glycine max
GLYMA12G32130
N
0.663
POPTR_0004s02060
Populus trichocarpa
POPTR_0004s02060
N
0.663
TCM_011327
Theobroma cacao
TCM_011327
N
0.663
MDP0000216918
Malus domestica
MDP0000216918
N
0.663
POPTR_0011s00390
Populus trichocarpa
POPTR_0011s00390
N
0.663
VIT_12s0059g02360
Vitis vinifera
VIT_12s0059g02360
N
0.663
POPTR_0017s06470
Populus trichocarpa
POPTR_0017s06470
N
0.663
SapurV1A.0345s0340
Salix purpurea
SapurV1A.0345s0340
N
0.663
GRMZM2G057955
Zea mays
GRMZM2G057955
N
0.661
LPERR01G19720
Leersia perrieri
LPERR01G19720
N
0.661
Sb03g028170
Sorghum bicolor
Sb03g028170
N
0.661
Pavir.J30777
Panicum virgatum
Pavir.J30777
N
0.661
Pavir.Eb02165
Panicum virgatum
Pavir.Eb02165
N
0.661
MLOC_68772
Hordeum vulgare
MLOC_68772
N
0.661