cassava46504.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava46504.m1 T284312_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava46504.m1 Myb 10 52

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.875
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.875
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.875
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.875
TCM_005177 Theobroma cacao TCM_005177 N 0.875
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.871
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.861
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.854
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.839
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.836
MDP0000583070 Malus domestica MDP0000583070 N 0.836
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.832
Pm018400 Prunus mume Pm018400 N 0.832
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.830
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.830
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.830
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.830
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.824
Ca_15029 Cicer arietinum Ca_15029 N 0.824
MDP0000141474 Malus domestica MDP0000141474 N 0.815
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.815
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.810
29742.m001447 Ricinus communis 29742.m001447 N 0.809
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.809
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.807
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.807
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.807
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.803
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.802
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.798
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.794
Carubv10003403m.g Capsella rubella Carubv10003403m.g N 0.794
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N 0.794
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.794
Bo3g022870 Brassica oleracea Bo3g022870 N 0.793
TRY Arabidopsis thaliana AT5G53200 N 0.793
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.793
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.793
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.793
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.793
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.793
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.792
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N 0.789
TCM_016428 Theobroma cacao TCM_016428 N 0.778
Thhalv10029104m.g Eutrema salsugineum Thhalv10029104m.g N 0.772
30169.m006531 Ricinus communis 30169.m006531 N 0.772
Bo9g110930 Brassica oleracea Bo9g110930 N 0.771
Bra026297 Brassica rapa Bra026297 N 0.770
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.765
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.765
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.765
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N 0.763
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.761
Bo2g098940 Brassica oleracea Bo2g098940 N 0.753
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N 0.753
Bra008539 Brassica rapa Bra008539 N 0.753
ETC3 Arabidopsis thaliana AT4G01060 N 0.753
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N 0.751
TCL1 Arabidopsis thaliana AT2G30432 N 0.751
Bo2g046050 Brassica oleracea Bo2g046050 N 0.748
Cucsa.201970 Cucumis sativus Cucsa.201970 N 0.745
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.743
Carubv10024393m.g Capsella rubella Carubv10024393m.g N 0.742
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.741
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N 0.734
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N 0.734
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.734
Bra000941 Brassica rapa Bra000941 N 0.732
Bo3g054440 Brassica oleracea Bo3g054440 N 0.732
MDP0000718806 Malus domestica MDP0000718806 N 0.728
MDP0000547418 Malus domestica MDP0000547418 N 0.728
Cla011563 Citrullus lanatus Cla011563 N 0.727
Carubv10025583m.g Capsella rubella Carubv10025583m.g N 0.726
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.726
Bo3g039260 Brassica oleracea Bo3g039260 N 0.720
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N 0.720
CPC Arabidopsis thaliana AT2G46410 N 0.720
Bo4g009260 Brassica oleracea Bo4g009260 N 0.720
Bo4g197120 Brassica oleracea Bo4g197120 N 0.720
Bra004539 Brassica rapa Bra004539 N 0.720
Bra039283 Brassica rapa Bra039283 N 0.720
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N 0.720
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N 0.720
Carubv10024406m.g Capsella rubella Carubv10024406m.g N 0.720
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.716
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N 0.713
Bra022637 Brassica rapa Bra022637 N 0.713
TCM_015351 Theobroma cacao TCM_015351 N 0.712
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N 0.709
Bostr.24513s0196 Boechera stricta Bostr.24513s0196 N 0.706
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N 0.705
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.703
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.703
ETC1 Arabidopsis thaliana AT1G01380 N 0.703
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.703
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.703
CPC Arabidopsis lyrata Al_scaffold_0005_3105 N 0.702
Cagra.0483s0079 Capsella grandiflora Cagra.0483s0079 N 0.702
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N 0.702
TCL2 Arabidopsis thaliana AT2G30424 N 0.698
TCL2 Arabidopsis lyrata scaffold_401531.1 N 0.698
GSMUA_Achr3G25090_001 Musa acuminata GSMUA_Achr3G25090_001 N 0.698
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N 0.693
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.692
Pm019781 Prunus mume Pm019781 N 0.691
Bostr.24513s0195 Boechera stricta Bostr.24513s0195 N 0.691
GSMUA_Achr1G05080_001 Musa acuminata GSMUA_Achr1G05080_001 N 0.688
MTR_2g088730 Medicago truncatula MTR_2g088730 N 0.686
Carubv10018233m.g Capsella rubella Carubv10018233m.g N 0.681
gene35171-v1.0-hybrid Fragaria vesca gene35171-v1.0-hybrid N 0.678
Lus10014933.g Linum usitatissimum Lus10014933.g N 0.676
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N 0.665
Bo3g024610 Brassica oleracea Bo3g024610 N 0.663