Lus10038822.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10038822.g T288202_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038822 Myb 30 73

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10014933.g Linum usitatissimum Lus10014933.g N 0.859
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.781
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.781
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.781
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.781
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.760
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.760
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.760
TCM_005177 Theobroma cacao TCM_005177 N 0.760
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.760
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.760
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.760
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.760
Ca_15029 Cicer arietinum Ca_15029 N 0.760
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.759
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.759
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.756
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.752
TCM_015351 Theobroma cacao TCM_015351 N 0.752
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.747
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.747
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.747
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.745
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.740
30169.m006531 Ricinus communis 30169.m006531 N 0.739
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.737
Pm018400 Prunus mume Pm018400 N 0.737
MDP0000141474 Malus domestica MDP0000141474 N 0.737
SapurV1A.0610s0050 Salix purpurea SapurV1A.0610s0050 N 0.736
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.735
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.734
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.731
MDP0000583070 Malus domestica MDP0000583070 N 0.728
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.728
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N 0.728
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N 0.728
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.727
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.727
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.726
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.725
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.724
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.724
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.724
ETC1 Arabidopsis thaliana AT1G01380 N 0.724
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.724
TCM_016428 Theobroma cacao TCM_016428 N 0.723
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.719
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.719
TRY Arabidopsis thaliana AT5G53200 N 0.719
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.719
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.719
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.719
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.717
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.716
Bo3g022870 Brassica oleracea Bo3g022870 N 0.713
gene35171-v1.0-hybrid Fragaria vesca gene35171-v1.0-hybrid N 0.712
29742.m001447 Ricinus communis 29742.m001447 N 0.709
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N 0.706
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.706
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.705
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.704
Eucgr.K00803 Eucalyptus grandis Eucgr.K00803 N 0.701
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.698
Bo9g110930 Brassica oleracea Bo9g110930 N 0.698
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.695
Pm019781 Prunus mume Pm019781 N 0.695
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N 0.695
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N 0.694
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.691
Bo3g024610 Brassica oleracea Bo3g024610 N 0.687
Cla011563 Citrullus lanatus Cla011563 N 0.685
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N 0.684
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N 0.684
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.681
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N 0.681
Carubv10003403m.g Capsella rubella Carubv10003403m.g N 0.681
Aquca_005_00061 Aquilegia coerulea Aquca_005_00061 N 0.680
ETC2 Arabidopsis thaliana AT2G30420 N 0.680
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N 0.678
TCL1 Arabidopsis thaliana AT2G30432 N 0.678
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N 0.678
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N 0.678
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.675
Carubv10025583m.g Capsella rubella Carubv10025583m.g N 0.675
Thhalv10017480m.g Eutrema salsugineum Thhalv10017480m.g N 0.675
CPC Arabidopsis thaliana AT2G46410 N 0.672
Bra026297 Brassica rapa Bra026297 N 0.672
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N 0.672
Bra004539 Brassica rapa Bra004539 N 0.672
Bo4g197120 Brassica oleracea Bo4g197120 N 0.672
Bo3g039260 Brassica oleracea Bo3g039260 N 0.672
Bo4g009260 Brassica oleracea Bo4g009260 N 0.672
Bra039283 Brassica rapa Bra039283 N 0.672
Carubv10024406m.g Capsella rubella Carubv10024406m.g N 0.672
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N 0.672
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N 0.672
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N 0.668
Carubv10024393m.g Capsella rubella Carubv10024393m.g N 0.668
Bo2g046050 Brassica oleracea Bo2g046050 N 0.668
Cucsa.201970 Cucumis sativus Cucsa.201970 N 0.667
OPUNC01G23150 Oryza punctata OPUNC01G23150 N 0.666
MDP0000718806 Malus domestica MDP0000718806 N 0.664
MDP0000547418 Malus domestica MDP0000547418 N 0.664
Bra022637 Brassica rapa Bra022637 N 0.664
Gorai.010G252300 Gossypium raimondii Gorai.010G252300 N 0.663
Bostr.24513s0196 Boechera stricta Bostr.24513s0196 N 0.662
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N 0.662