POPTR_0015s02310 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0015s02310 T278465_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0015s02310.1 Myb 32 74

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.887
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.887
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.887
TCM_015351 Theobroma cacao TCM_015351 N 0.871
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.856
30169.m006531 Ricinus communis 30169.m006531 N 0.846
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.836
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.824
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.814
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.791
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.791
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.791
ETC1 Arabidopsis thaliana AT1G01380 N 0.791
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.791
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.789
gene35171-v1.0-hybrid Fragaria vesca gene35171-v1.0-hybrid N 0.786
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.778
TCM_005177 Theobroma cacao TCM_005177 N 0.778
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.778
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.778
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.778
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.778
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.776
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.776
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.774
Lus10038822.g Linum usitatissimum Lus10038822.g N 0.759
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.757
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.756
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.749
Pm018400 Prunus mume Pm018400 N 0.749
Bo9g110930 Brassica oleracea Bo9g110930 N 0.744
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.744
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.743
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.742
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.741
Ca_15029 Cicer arietinum Ca_15029 N 0.741
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.739
MDP0000583070 Malus domestica MDP0000583070 N 0.739
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N 0.736
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.736
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.733
Carubv10003403m.g Capsella rubella Carubv10003403m.g N 0.733
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.733
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.733
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.733
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N 0.733
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.732
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.732
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N 0.728
29742.m001447 Ricinus communis 29742.m001447 N 0.726
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.725
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.724
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.723
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.723
Bo3g022870 Brassica oleracea Bo3g022870 N 0.723
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.723
TRY Arabidopsis thaliana AT5G53200 N 0.723
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.723
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.723
cassava11157.m1 Manihot esculenta cassava11157.m1 N 0.721
PK11198.1 Cannabis sativa PK11198.1 N 0.721
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N 0.718
MDP0000141474 Malus domestica MDP0000141474 N 0.718
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N 0.718
Carubv10024393m.g Capsella rubella Carubv10024393m.g N 0.715
Thhalv10009233m.g Eutrema salsugineum Thhalv10009233m.g N 0.715
30086.m000210 Ricinus communis 30086.m000210 N 0.714
29842.m003592 Ricinus communis 29842.m003592 N 0.714
gene23919-v1.0-hybrid Fragaria vesca gene23919-v1.0-hybrid N 0.714
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N 0.714
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N 0.714
Pm009748 Prunus mume Pm009748 N 0.714
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N 0.714
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N 0.714
MDP0000499190 Malus domestica MDP0000499190 N 0.714
MDP0000387366 Malus domestica MDP0000387366 N 0.714
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.714
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N 0.714
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N 0.714
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N 0.714
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N 0.714
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N 0.714
GLYMA12G32130 Glycine max GLYMA12G32130 N 0.714
MDP0000270078 Malus domestica MDP0000270078 N 0.714
TCM_011327 Theobroma cacao TCM_011327 N 0.714
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N 0.714
MDP0000216918 Malus domestica MDP0000216918 N 0.714
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N 0.714
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N 0.714
TCM_046858 Theobroma cacao TCM_046858 N 0.714
Thhalv10029104m.g Eutrema salsugineum Thhalv10029104m.g N 0.712
PRUPE_ppa024794mg Prunus persica PRUPE_ppa024794mg N 0.712
Bo8g117860 Brassica oleracea Bo8g117860 N 0.711
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.711
Bra032635 Brassica rapa Bra032635 N 0.711
Pm019781 Prunus mume Pm019781 N 0.710
Lus10014933.g Linum usitatissimum Lus10014933.g N 0.709
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N 0.708
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.708
Cla011563 Citrullus lanatus Cla011563 N 0.707
TCM_016428 Theobroma cacao TCM_016428 N 0.707
Gorai.002G083400 Gossypium raimondii Gorai.002G083400 N 0.706
Aquca_012_00145 Aquilegia coerulea Aquca_012_00145 N 0.705
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N 0.705
mgf009009m Mimulus guttatus mgf009009m N 0.701
Bo3g024610 Brassica oleracea Bo3g024610 N 0.696
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N 0.694
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N 0.694
GSMUA_AchrUn_randomG19730_001 Musa acuminata GSMUA_AchrUn_randomG19730_001 N 0.693
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N 0.692
Bo2g098940 Brassica oleracea Bo2g098940 N 0.692
ETC3 Arabidopsis thaliana AT4G01060 N 0.692
Bra008539 Brassica rapa Bra008539 N 0.692
Cucsa.201970 Cucumis sativus Cucsa.201970 N 0.691
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.691
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N 0.686
OPUNC01G23150 Oryza punctata OPUNC01G23150 N 0.682
cassava4691.m1 Manihot esculenta cassava4691.m1 N 0.682
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N 0.681
TCL1 Arabidopsis thaliana AT2G30432 N 0.681
Solyc07g052490.2 Solanum lycopersicum Solyc07g052490.2 N 0.680
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.679
Bo9g003750 Brassica oleracea Bo9g003750 N 0.679
Bra037388 Brassica rapa Bra037388 N 0.679
Bo2g046050 Brassica oleracea Bo2g046050 N 0.677
VIT_10s0116g00500 Vitis vinifera VIT_10s0116g00500 N 0.674
GLYMA12G10790 Glycine max GLYMA12G10790 N 0.672
MTR_4g046737 Medicago truncatula MTR_4g046737 N 0.672
GLYMA06G45941 Glycine max GLYMA06G45941 N 0.672
Gorai.008G172400 Gossypium raimondii Gorai.008G172400 N 0.672
PDK_20s1649381g001 Phoenix dactylifera PDK_20s1649381g001 N 0.671
Bostr.24513s0195 Boechera stricta Bostr.24513s0195 N 0.671
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N 0.671
TCL2 Arabidopsis lyrata scaffold_401531.1 N 0.671
Bo3g054440 Brassica oleracea Bo3g054440 N 0.671
TCL2 Arabidopsis thaliana AT2G30424 N 0.671
Bra000941 Brassica rapa Bra000941 N 0.671
MLOC_68772 Hordeum vulgare MLOC_68772 N 0.668
Pavir.Eb02165 Panicum virgatum Pavir.Eb02165 N 0.668
Pavir.J30777 Panicum virgatum Pavir.J30777 N 0.668
GRMZM2G057955 Zea mays GRMZM2G057955 N 0.668
Sb03g028170 Sorghum bicolor Sb03g028170 N 0.668
29842.m003644 Ricinus communis 29842.m003644 N 0.667
Cagra.0567s0009 Capsella grandiflora Cagra.0567s0009 N 0.664
Al_scaffold_0136_3 Arabidopsis lyrata Al_scaffold_0136_3 N 0.664
LPERR01G19720 Leersia perrieri LPERR01G19720 N 0.661
GSMUA_Achr1G05080_001 Musa acuminata GSMUA_Achr1G05080_001 N 0.661
TRAES3BF020200120CFD_g Triticum aestivum TRAES3BF020200120CFD_g N 0.661
TRIUR3_10842 Triticum urartu TRIUR3_10842 N 0.661
Traes_3DL_30CF35BB3 Triticum aestivum Traes_3DL_30CF35BB3 N 0.661