GRMZM2G149958 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G149958 T272080_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.661 0.728
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.661 0.728
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.661 0.728
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G149958_P01 Myb 124 169

Links

Other Myb/SANT family TFs
Other Zea mays TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.886
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.784
Si022762m.g Setaria italica Si022762m.g N 0.774
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.773
OB04G36550 Oryza brachyantha OB04G36550 N 0.762
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.747
OMERI04G25000 Oryza meridionalis OMERI04G25000 N 0.739
OPUNC04G27130 Oryza punctata OPUNC04G27130 N 0.739
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.732
OBART04G29570 Oryza barthii OBART04G29570 N 0.728
ONIVA04G28100 Oryza nivara ONIVA04G28100 N 0.728
OS04G0676700 Oryza sativa OS04G0676700 N 0.728
ORGLA04G0258700 Oryza glaberrima ORGLA04G0258700 N 0.728
ORUFI04G31270 Oryza rufipogon ORUFI04G31270 N 0.728
BGIOSGA014092 Oryza indica BGIOSGA014092 N 0.728
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.722
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.721
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.717
30131.m007263 Ricinus communis 30131.m007263 I 0.716
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.716
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.716
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.715
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.715
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.713
LPERR04G25100 Leersia perrieri LPERR04G25100 N 0.712
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.711
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.711
PK13672.1 Cannabis sativa PK13672.1 I 0.710
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.710
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.710
OGLUM04G29490 Oryza glumaepatula OGLUM04G29490 N 0.708
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.705
TCM_007672 Theobroma cacao TCM_007672 I 0.705
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.705
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.705
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.696
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.695
mgf009460m Mimulus guttatus mgf009460m I 0.681
Cla020348 Citrullus lanatus Cla020348 I 0.680
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.675
Pm006046 Prunus mume Pm006046 I 0.672
Cla009230 Citrullus lanatus Cla009230 I 0.669
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.669
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.669
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.669
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.668
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.667
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.667
GSMUA_Achr9G21870_001 Musa acuminata GSMUA_Achr9G21870_001 N 0.664
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.664
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.663
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.661
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.661
SRM1 Arabidopsis thaliana AT5G08520 D 0.661
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.661