TCM_007672 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_007672 T280456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.724 0.846
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.724 0.846
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.724 0.846
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX99047 Myb 122 167
EOX99048 Myb 122 167
EOX99049 Myb 122 167
EOX99050 Myb 122 167
EOX99051 Myb 122 167
EOX99052 Myb 122 167
EOX99053 Myb 122 167

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.898
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.898
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.889
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.883
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.867
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.864
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.862
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.859
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.851
30131.m007263 Ricinus communis 30131.m007263 I 0.849
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.844
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.843
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.841
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.832
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.831
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.825
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.824
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.824
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.822
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.819
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.814
Cla020348 Citrullus lanatus Cla020348 I 0.813
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.810
Pm006046 Prunus mume Pm006046 I 0.805
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.798
Cla009230 Citrullus lanatus Cla009230 I 0.798
Ca_19000 Cicer arietinum Ca_19000 I 0.797
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.796
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.796
PK13672.1 Cannabis sativa PK13672.1 I 0.796
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.789
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.782
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.772
mgf009460m Mimulus guttatus mgf009460m I 0.769
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.755
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.754
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.740
Si022762m.g Setaria italica Si022762m.g N 0.735
gene00786-v1.0-hybrid Fragaria vesca gene00786-v1.0-hybrid N 0.730
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.730
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.724
SRM1 Arabidopsis thaliana AT5G08520 D 0.724
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.724
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.724
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.722
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I 0.719
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I 0.712
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.711
Bostr.10199s0068 Boechera stricta Bostr.10199s0068 I 0.709
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.705
GRMZM2G149958 Zea mays GRMZM2G149958 I 0.705
OB04G36550 Oryza brachyantha OB04G36550 N 0.700
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.696
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.695
Pm017050 Prunus mume Pm017050 I 0.695
MTR_8g063600 Medicago truncatula MTR_8g063600 N 0.688
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.686
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.682
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.678
Bo9g174380 Brassica oleracea Bo9g174380 I 0.676
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.672
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.672
Ca_05454 Cicer arietinum Ca_05454 I 0.672
Ca_14522 Cicer arietinum Ca_14522 N 0.670
MDP0000289018 Malus domestica MDP0000289018 I 0.670
TCM_041160 Theobroma cacao TCM_041160 I 0.669
ONIVA04G28100 Oryza nivara ONIVA04G28100 N 0.666
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.665
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.664
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.664
Bo2g009130 Brassica oleracea Bo2g009130 I 0.663
Bo3g004970 Brassica oleracea Bo3g004970 I 0.663
cassava42566.valid.m1 Manihot esculenta cassava42566.valid.m1 N 0.663