GLYMA20G24600 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA20G24600 T271814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04760
M02304_2.00 		Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN		 PBM
Weirauch et al.(2014)
pTH7079 		0.731 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G24600.1 Myb 14 63
GLYMA20G24600.1 Myb 120 167

Links

Other Myb/SANT family TFs
Other Glycine max TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.909
Ca_05454 Cicer arietinum Ca_05454 I 0.844
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.833
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.818
GSMUA_Achr11G09110_001 Musa acuminata GSMUA_Achr11G09110_001 N 0.773
TCM_041362 Theobroma cacao TCM_041362 N 0.759
VIT_06s0080g00790 Vitis vinifera VIT_06s0080g00790 I 0.754
Cla013899 Citrullus lanatus Cla013899 N 0.752
Pm017050 Prunus mume Pm017050 I 0.749
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.749
TCM_041160 Theobroma cacao TCM_041160 I 0.749
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.746
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.744
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.744
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.744
Bo9g178980 Brassica oleracea Bo9g178980 I 0.744
Bra009432 Brassica rapa Bra009432 I 0.744
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.744
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.743
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.731
Bo3g002960 Brassica oleracea Bo3g002960 I 0.731
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.727
Thhalv10014613m.g Eutrema salsugineum Thhalv10014613m.g I 0.725
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.722
Bra005818 Brassica rapa Bra005818 I 0.721
30055.m001589 Ricinus communis 30055.m001589 I 0.721
MDP0000289018 Malus domestica MDP0000289018 I 0.720
Cla014242 Citrullus lanatus Cla014242 N 0.716
Cucsa.364590 Cucumis sativus Cucsa.364590 N 0.715
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I 0.713
orange1.1g026855m.g Citrus sinensis orange1.1g026855m.g N 0.710
Ciclev10029205m.g Citrus clementina Ciclev10029205m.g N 0.710
Bo2g006670 Brassica oleracea Bo2g006670 I 0.709
Bra028780 Brassica rapa Bra028780 I 0.706
PGSC0003DMG400007603 Solanum tuberosum PGSC0003DMG400007603 N 0.705
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.703
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.701
Gorai.006G113100 Gossypium raimondii Gorai.006G113100 N 0.700
Si022762m.g Setaria italica Si022762m.g N 0.700
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.697
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.693
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.693
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.692
PGSC0003DMG400023495 Solanum tuberosum PGSC0003DMG400023495 N 0.692
Solyc05g055240.2 Solanum lycopersicum Solyc05g055240.2 N 0.692
MDP0000610242 Malus domestica MDP0000610242 N 0.688
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.686
Gorai.006G118200 Gossypium raimondii Gorai.006G118200 I 0.685
PK13672.1 Cannabis sativa PK13672.1 I 0.684
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.682
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.682
30131.m007263 Ricinus communis 30131.m007263 I 0.682
Solyc11g006720.1 Solanum lycopersicum Solyc11g006720.1 N 0.682
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.682
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.682
cassava42566.valid.m1 Manihot esculenta cassava42566.valid.m1 N 0.681
POPTR_0010s24710 Populus trichocarpa POPTR_0010s24710 I 0.680
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.680
Cla020348 Citrullus lanatus Cla020348 I 0.679
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.678
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.677
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.676
mgf009460m Mimulus guttatus mgf009460m I 0.675
Cucsa.103200 Cucumis sativus Cucsa.103200 N 0.674
Pm000529 Prunus mume Pm000529 I 0.673
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.673
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I 0.673
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.672
TCM_007672 Theobroma cacao TCM_007672 I 0.672
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.672
SELMODRAFT_47760 Selaginella moellendorffii SELMODRAFT_47760 N 0.671
SELMODRAFT_47768 Selaginella moellendorffii SELMODRAFT_47768 N 0.671
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.670
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.669
MTR_3g462790 Medicago truncatula MTR_3g462790 I 0.669
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.668
Ca_15603 Cicer arietinum Ca_15603 I 0.668
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.668
GLYMA02G39000 Glycine max GLYMA02G39000 I 0.668
Bo1g142610 Brassica oleracea Bo1g142610 N 0.667
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.666
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.666
Cla009230 Citrullus lanatus Cla009230 I 0.665
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.665
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.665
GSMUA_Achr8G02260_001 Musa acuminata GSMUA_Achr8G02260_001 N 0.665
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.664
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.662