MDP0000289018 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000289018 T288555_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04760
M02304_2.00 		Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN		 PBM
Weirauch et al.(2014)
pTH7079 		0.684 0.798
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000289018 Myb 18 67
MDP0000289018 Myb 111 158

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm017050 Prunus mume Pm017050 I 0.846
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.842
MDP0000610242 Malus domestica MDP0000610242 N 0.818
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.738
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.733
TCM_041160 Theobroma cacao TCM_041160 I 0.732
Gorai.006G118200 Gossypium raimondii Gorai.006G118200 I 0.723
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.720
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.720
Ca_05454 Cicer arietinum Ca_05454 I 0.713
Bra005818 Brassica rapa Bra005818 I 0.707
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.706
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.703
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.701
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.701
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.701
Bo2g006670 Brassica oleracea Bo2g006670 I 0.698
Cla013899 Citrullus lanatus Cla013899 N 0.687
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.684
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.684
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.684
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.684
Bo9g178980 Brassica oleracea Bo9g178980 I 0.684
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.684
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.684
Bra009432 Brassica rapa Bra009432 I 0.684
Bo3g002960 Brassica oleracea Bo3g002960 I 0.684
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I 0.681
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.680
30131.m007263 Ricinus communis 30131.m007263 I 0.680
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.680
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.680
GSMUA_Achr11G09110_001 Musa acuminata GSMUA_Achr11G09110_001 N 0.679
TCM_041362 Theobroma cacao TCM_041362 N 0.678
30055.m001589 Ricinus communis 30055.m001589 I 0.678
VIT_06s0080g00790 Vitis vinifera VIT_06s0080g00790 I 0.678
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.675
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.674
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.674
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.674
Cla020348 Citrullus lanatus Cla020348 I 0.671
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.671
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.670
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.670
TCM_007672 Theobroma cacao TCM_007672 I 0.670
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.670
Bra028780 Brassica rapa Bra028780 I 0.670
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.669
Pm006046 Prunus mume Pm006046 I 0.669
OMERI01G35110 Oryza meridionalis OMERI01G35110 N 0.667
OPUNC01G36990 Oryza punctata OPUNC01G36990 N 0.667
BGIOSGA004852 Oryza indica BGIOSGA004852 N 0.667
Ciclev10029205m.g Citrus clementina Ciclev10029205m.g N 0.667
OBART01G38220 Oryza barthii OBART01G38220 N 0.667
orange1.1g026855m.g Citrus sinensis orange1.1g026855m.g N 0.667
ORGLA01G0320500 Oryza glaberrima ORGLA01G0320500 N 0.667
OGLUM01G42400 Oryza glumaepatula OGLUM01G42400 N 0.667
ONIVA01G42920 Oryza nivara ONIVA01G42920 N 0.667
OS01G0863300 Oryza sativa OS01G0863300 N 0.667
mgf016380m Mimulus guttatus mgf016380m N 0.667
ORUFI01G41590 Oryza rufipogon ORUFI01G41590 N 0.667
POPTR_0010s24710 Populus trichocarpa POPTR_0010s24710 I 0.667
Lus10041088.g Linum usitatissimum Lus10041088.g N 0.665
Cucsa.364590 Cucumis sativus Cucsa.364590 N 0.665
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.663
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.663
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.663
Cla009230 Citrullus lanatus Cla009230 I 0.663
Thhalv10014613m.g Eutrema salsugineum Thhalv10014613m.g I 0.662
OS05G0442400 Oryza sativa OS05G0442400 N 0.661
BGIOSGA017965 Oryza indica BGIOSGA017965 N 0.661
BGIOSGA017964 Oryza indica BGIOSGA017964 N 0.661
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.661
ORUFI05G19340 Oryza rufipogon ORUFI05G19340 N 0.661
ONIVA05G19090 Oryza nivara ONIVA05G19090 N 0.661
OPUNC05G16000 Oryza punctata OPUNC05G16000 N 0.661
ORGLA05G0157700 Oryza glaberrima ORGLA05G0157700 N 0.661
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.661
OGLUM05G19230 Oryza glumaepatula OGLUM05G19230 N 0.661
OGLUM05G19240 Oryza glumaepatula OGLUM05G19240 N 0.661
ORUFI05G19330 Oryza rufipogon ORUFI05G19330 N 0.661