SapurV1A.0234s0050 (Salix purpurea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 SapurV1A.0234s0050 T289655_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.734 0.846
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.734 0.846
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.734 0.846
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0234s0050.1.p Myb 122 167
SapurV1A.0234s0050.2.p Myb 122 167
SapurV1A.0234s0050.3.p Myb 122 167
SapurV1A.0234s0050.4.p Myb 122 167
SapurV1A.0234s0050.5.p Myb 122 167
SapurV1A.0234s0050.6.p Myb 122 167
SapurV1A.0234s0050.7.p Myb 122 167
SapurV1A.0234s0050.8.p Myb 122 167

Links

Other Myb/SANT family TFs
Other Salix purpurea TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.877
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.877
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.869
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.862
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.862
TCM_007672 Theobroma cacao TCM_007672 I 0.862
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.857
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.853
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.852
30131.m007263 Ricinus communis 30131.m007263 I 0.848
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.848
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.843
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.840
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.836
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.836
Cla020348 Citrullus lanatus Cla020348 I 0.834
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.833
Pm006046 Prunus mume Pm006046 I 0.831
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.830
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.824
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.824
Cla009230 Citrullus lanatus Cla009230 I 0.824
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.824
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.823
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.822
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.822
PK13672.1 Cannabis sativa PK13672.1 I 0.817
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.803
Ca_19000 Cicer arietinum Ca_19000 I 0.802
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.800
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.799
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.785
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.782
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.765
mgf009460m Mimulus guttatus mgf009460m I 0.764
gene00786-v1.0-hybrid Fragaria vesca gene00786-v1.0-hybrid N 0.756
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.751
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.745
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.740
Si022762m.g Setaria italica Si022762m.g N 0.735
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.734
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.734
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.734
SRM1 Arabidopsis thaliana AT5G08520 D 0.734
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I 0.729
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I 0.722
GRMZM2G149958 Zea mays GRMZM2G149958 I 0.716
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.716
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.712
OB04G36550 Oryza brachyantha OB04G36550 N 0.710
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.700
Bostr.10199s0068 Boechera stricta Bostr.10199s0068 I 0.699
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.694
Pm017050 Prunus mume Pm017050 I 0.694
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.692
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.686
Bo9g174380 Brassica oleracea Bo9g174380 I 0.686
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.682
Ca_05454 Cicer arietinum Ca_05454 I 0.682
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.682
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.677
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.674
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.674
Bo3g004970 Brassica oleracea Bo3g004970 I 0.673
Bo2g009130 Brassica oleracea Bo2g009130 I 0.673
MDP0000289018 Malus domestica MDP0000289018 I 0.669
TCM_041160 Theobroma cacao TCM_041160 I 0.669
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.667
TCM_012262 Theobroma cacao TCM_012262 I 0.666
OPUNC04G27130 Oryza punctata OPUNC04G27130 N 0.666
ONIVA04G28100 Oryza nivara ONIVA04G28100 N 0.666
OS04G0676700 Oryza sativa OS04G0676700 N 0.666
ORUFI04G31270 Oryza rufipogon ORUFI04G31270 N 0.666
OBART04G29570 Oryza barthii OBART04G29570 N 0.666
OMERI04G25000 Oryza meridionalis OMERI04G25000 N 0.666
ORGLA04G0258700 Oryza glaberrima ORGLA04G0258700 N 0.666
BGIOSGA014092 Oryza indica BGIOSGA014092 N 0.666
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.665
Bra009346 Brassica rapa Bra009346 I 0.665
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.664
Eucgr.K02659 Eucalyptus grandis Eucgr.K02659 I 0.663
Bra028654 Brassica rapa Bra028654 I 0.662
30174.m008717 Ricinus communis 30174.m008717 I 0.662
MTR_8g063600 Medicago truncatula MTR_8g063600 N 0.661