Pavir.Ga00233 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ga00233 T289206_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga00233.1.p Myb 18 68
Pavir.Ga00233.1.p Myb 127 172

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.887
Si022762m.g Setaria italica Si022762m.g N 0.856
OB04G36550 Oryza brachyantha OB04G36550 N 0.782
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.780
GRMZM2G149958 Zea mays GRMZM2G149958 I 0.773
ORUFI04G31270 Oryza rufipogon ORUFI04G31270 N 0.761
OMERI04G25000 Oryza meridionalis OMERI04G25000 N 0.761
ORGLA04G0258700 Oryza glaberrima ORGLA04G0258700 N 0.761
OS04G0676700 Oryza sativa OS04G0676700 N 0.761
ONIVA04G28100 Oryza nivara ONIVA04G28100 N 0.761
BGIOSGA014092 Oryza indica BGIOSGA014092 N 0.761
OBART04G29570 Oryza barthii OBART04G29570 N 0.761
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.756
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.756
OGLUM04G29490 Oryza glumaepatula OGLUM04G29490 N 0.752
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.751
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.751
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.746
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.746
PK13672.1 Cannabis sativa PK13672.1 I 0.742
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.741
30131.m007263 Ricinus communis 30131.m007263 I 0.740
mgf009460m Mimulus guttatus mgf009460m I 0.739
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.739
OPUNC04G27130 Oryza punctata OPUNC04G27130 N 0.738
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.737
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.734
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.731
TCM_007672 Theobroma cacao TCM_007672 I 0.730
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.730
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.730
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.726
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.722
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.721
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.719
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.718
Cla020348 Citrullus lanatus Cla020348 I 0.715
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.713
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.712
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.708
Ca_19000 Cicer arietinum Ca_19000 I 0.704
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.703
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.703
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.700
Ca_05454 Cicer arietinum Ca_05454 I 0.697
Pm006046 Prunus mume Pm006046 I 0.696
LPERR04G25100 Leersia perrieri LPERR04G25100 N 0.694
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.694
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.693
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.693
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.693
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.693
Cla009230 Citrullus lanatus Cla009230 I 0.693
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.693
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.688
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.688
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.687
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.686
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.682
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.680
GSMUA_Achr9G21870_001 Musa acuminata GSMUA_Achr9G21870_001 N 0.677
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.677
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.673
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.662