GRMZM2G056929 (Zea mays)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 GRMZM2G056929 T321379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G056929_P01 S1FA 1 56
GRMZM2G056929_P02 S1FA 15 80

Links

Other S1FA family TFs
Other Zea mays TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.970
Si011030m.g Setaria italica Si011030m.g N 0.970
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.970
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.970
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.939
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.929
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.924
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.924
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.924
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.924
OB04G18770 Oryza brachyantha OB04G18770 I 0.911
OBART04G11650 Oryza barthii OBART04G11650 N 0.909
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.909
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.909
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.909
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.909
S1FA2 Oryza sativa OS04G0408700 N 0.909
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.909
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.894
OB04G18780 Oryza brachyantha OB04G18780 I 0.894
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.894
OPUNC04G09650 Oryza punctata OPUNC04G09650 I 0.893
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.879
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.879
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.879
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.879
OS04G0408900 Oryza sativa OS04G0408900 N 0.879
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.879
OBART04G11660 Oryza barthii OBART04G11660 N 0.879
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.879
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.879
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.879
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.848
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.839
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.818
Cla018556 Citrullus lanatus Cla018556 I 0.786
MDP0000559232 Malus domestica MDP0000559232 N 0.786
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.786
MDP0000276000 Malus domestica MDP0000276000 N 0.786
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.768
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.768
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.768
Cla018106 Citrullus lanatus Cla018106 I 0.768
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.768
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.768
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.758
Bo6g067310 Brassica oleracea Bo6g067310 I 0.750
mgf000337m Mimulus guttatus mgf000337m I 0.750
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.750
Bra003132 Brassica rapa Bra003132 I 0.750
Pm002519 Prunus mume Pm002519 N 0.742
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.742
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.732
Bra006994 Brassica rapa Bra006994 I 0.732
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.732
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.732
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.732
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.732
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N 0.732
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.732
S1FA1 Arabidopsis thaliana AT3G53370 I 0.732
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.732
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.732
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.732
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I 0.732
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.732
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.732
TCM_022113 Theobroma cacao TCM_022113 I 0.727
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.714
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.714
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.714
Thhalv10010878m.g Eutrema salsugineum Thhalv10010878m.g I 0.714
Carubv10025429m.g Capsella rubella Carubv10025429m.g I 0.714
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.714
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.714
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.714
Bo00703s130 Brassica oleracea Bo00703s130 I 0.714
29805.m001471 Ricinus communis 29805.m001471 I 0.714
Bra039779 Brassica rapa Bra039779 I 0.714
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I 0.714
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.714
Bo00703s150 Brassica oleracea Bo00703s150 I 0.714
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.712
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.712
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.712
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.712