OB04G18770 (Oryza brachyantha)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 OB04G18770 T321397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB04G18770.1 S1FA 119 184

Links

Other S1FA family TFs
Other Oryza brachyantha TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.970
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.970
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.970
S1FA2 Oryza sativa OS04G0408700 N 0.970
OBART04G11650 Oryza barthii OBART04G11650 N 0.970
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.970
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.970
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.955
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.955
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.939
Si011030m.g Setaria italica Si011030m.g N 0.939
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.939
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.924
OB04G18780 Oryza brachyantha OB04G18780 I 0.924
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.924
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.924
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.924
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.911
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.909
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.909
OBART04G11660 Oryza barthii OBART04G11660 N 0.909
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.909
OS04G0408900 Oryza sativa OS04G0408900 N 0.909
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.909
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.909
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.909
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.909
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.909
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.909
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.909
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.909
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.909
OPUNC04G09650 Oryza punctata OPUNC04G09650 I 0.833
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.818
S1FA1 Arabidopsis thaliana AT3G53370 I 0.794
TCM_022113 Theobroma cacao TCM_022113 I 0.788
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.788
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.788
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.788
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.773
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.773
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.773
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.773
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.758
Cla018556 Citrullus lanatus Cla018556 I 0.758
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.758
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.758
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.758
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.758
MDP0000276000 Malus domestica MDP0000276000 N 0.758
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N 0.758
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.758
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.758
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.758
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.742
Cla018106 Citrullus lanatus Cla018106 I 0.742
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.742
mgf000337m Mimulus guttatus mgf000337m I 0.742
Pm002519 Prunus mume Pm002519 N 0.742
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.742
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.742
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.742
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.742
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.742
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.742
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.742
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.742
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.742
Carubv10018341m.g Capsella rubella Carubv10018341m.g I 0.727
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I 0.727
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.727
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.727
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.727
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.727
MTR_7g100890 Medicago truncatula MTR_7g100890 I 0.727
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.727
Bra029784 Brassica rapa Bra029784 I 0.727
Bra003132 Brassica rapa Bra003132 I 0.727
S1FA3 Arabidopsis thaliana AT3G09735 D 0.727
Bo6g067310 Brassica oleracea Bo6g067310 I 0.727
Carubv10015035m.g Capsella rubella Carubv10015035m.g I 0.727
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.727
Ca_12027 Cicer arietinum Ca_12027 I 0.727
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I 0.727
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.727
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I 0.727
Bo5g138130 Brassica oleracea Bo5g138130 I 0.712
mgf004062m Mimulus guttatus mgf004062m I 0.712
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I 0.712
29805.m001471 Ricinus communis 29805.m001471 I 0.712
fgenesh2_kg.3__997__AT3G09735.1 Arabidopsis lyrata fgenesh2_kg.3__997__AT3G09735.1 I 0.703