LPERR04G08410 (Leersia perrieri)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 LPERR04G08410 T321387_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR04G08410.1 S1FA 15 80

Links

Other S1FA family TFs
Other Leersia perrieri TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB04G18780 Oryza brachyantha OB04G18780 I 0.955
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.939
OBART04G11660 Oryza barthii OBART04G11660 N 0.939
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.939
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.939
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.939
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.939
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.939
OS04G0408900 Oryza sativa OS04G0408900 N 0.939
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.939
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.939
OBART04G11650 Oryza barthii OBART04G11650 N 0.909
OB04G18770 Oryza brachyantha OB04G18770 I 0.909
S1FA2 Oryza sativa OS04G0408700 N 0.909
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.909
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.909
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.909
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.909
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.909
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.909
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.894
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.894
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.894
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.894
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.894
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.879
Si011030m.g Setaria italica Si011030m.g N 0.879
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.879
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.848
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.848
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.848
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.833
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.818
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.803
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.803
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.803
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.803
TCM_022113 Theobroma cacao TCM_022113 I 0.788
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.788
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.773
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.773
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.773
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.773
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.773
Cla018556 Citrullus lanatus Cla018556 I 0.773
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.758
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.758
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.758
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.758
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.758
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.758
OPUNC04G09650 Oryza punctata OPUNC04G09650 I 0.758
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.758
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.758
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.758
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N 0.758
29805.m001471 Ricinus communis 29805.m001471 I 0.742
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.742
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I 0.742
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.742
Carubv10015035m.g Capsella rubella Carubv10015035m.g I 0.742
Cla018106 Citrullus lanatus Cla018106 I 0.742
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.742
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I 0.742
S1FA3 Arabidopsis thaliana AT3G09735 D 0.742
Bra029784 Brassica rapa Bra029784 I 0.742
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.742
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.742
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.727
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.727
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.727
MTR_7g100890 Medicago truncatula MTR_7g100890 I 0.727
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.727
Ca_12027 Cicer arietinum Ca_12027 I 0.727
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.727
Bo5g138130 Brassica oleracea Bo5g138130 I 0.727
Pm002519 Prunus mume Pm002519 N 0.727
MDP0000276000 Malus domestica MDP0000276000 N 0.727
mgf004062m Mimulus guttatus mgf004062m I 0.727
mgf000337m Mimulus guttatus mgf000337m I 0.727
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.727
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.712
Bra034084 Brassica rapa Bra034084 I 0.712
Bo3g061880 Brassica oleracea Bo3g061880 I 0.712
S1FA2 Arabidopsis thaliana AT2G37120 I 0.712
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.712
S1FA1 Arabidopsis thaliana AT3G53370 I 0.712
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.712
Bostr.22252s0094 Boechera stricta Bostr.22252s0094 I 0.712
Bo1g144300 Brassica oleracea Bo1g144300 I 0.712
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.712