GLYMA10G05790 (Glycine max)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 GLYMA10G05790 T321376_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA10G05790.1 S1FA 17 82

Links

Other S1FA family TFs
Other Glycine max TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.939
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.924
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.924
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.879
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.879
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.879
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.864
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.864
Ca_12027 Cicer arietinum Ca_12027 I 0.864
MTR_7g100890 Medicago truncatula MTR_7g100890 I 0.864
Ca_12028 Cicer arietinum Ca_12028 I 0.864
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.864
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.864
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.848
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.848
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.848
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.848
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.833
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.833
Cla018106 Citrullus lanatus Cla018106 I 0.833
PGSC0003DMG401017590 Solanum tuberosum PGSC0003DMG401017590 I 0.833
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.818
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.818
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.818
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.818
mgf000337m Mimulus guttatus mgf000337m I 0.818
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.818
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.818
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.818
TCM_022113 Theobroma cacao TCM_022113 I 0.818
29805.m001471 Ricinus communis 29805.m001471 I 0.803
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.803
Cla018556 Citrullus lanatus Cla018556 I 0.803
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.803
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.788
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.788
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.788
Bra029784 Brassica rapa Bra029784 I 0.773
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I 0.773
Carubv10015035m.g Capsella rubella Carubv10015035m.g I 0.773
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.773
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I 0.773
PK08477.1 Cannabis sativa PK08477.1 I 0.773
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.773
S1FA3 Arabidopsis thaliana AT3G09735 D 0.773
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.758
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.758
Pm002519 Prunus mume Pm002519 N 0.758
S1FA1 Arabidopsis thaliana AT3G53370 I 0.758
Bo5g138130 Brassica oleracea Bo5g138130 I 0.758
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.758
fgenesh2_kg.3__997__AT3G09735.1 Arabidopsis lyrata fgenesh2_kg.3__997__AT3G09735.1 I 0.750
Bo1g144300 Brassica oleracea Bo1g144300 I 0.742
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I 0.742
Bostr.22252s0094 Boechera stricta Bostr.22252s0094 I 0.742
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I 0.742
Carubv10018341m.g Capsella rubella Carubv10018341m.g I 0.742
Bo3g061880 Brassica oleracea Bo3g061880 I 0.742
OB04G18770 Oryza brachyantha OB04G18770 I 0.742
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.742
Bra034084 Brassica rapa Bra034084 I 0.742
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N 0.727
MDP0000276000 Malus domestica MDP0000276000 N 0.727
OB04G18780 Oryza brachyantha OB04G18780 I 0.727
mgf004062m Mimulus guttatus mgf004062m I 0.727
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.727
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I 0.727
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.727
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.714
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.712
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.712
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.712
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.712
Thhalv10010878m.g Eutrema salsugineum Thhalv10010878m.g I 0.712
S1FA2 Arabidopsis thaliana AT2G37120 I 0.712
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.712
OBART04G11650 Oryza barthii OBART04G11650 N 0.712
OBART04G11660 Oryza barthii OBART04G11660 N 0.712
Carubv10025429m.g Capsella rubella Carubv10025429m.g I 0.712
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I 0.712
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.712
S1FA2 Oryza sativa OS04G0408700 N 0.712
OS04G0408900 Oryza sativa OS04G0408900 N 0.712
Bo6g067310 Brassica oleracea Bo6g067310 I 0.712
Bra003132 Brassica rapa Bra003132 I 0.712
Bostr.23794s0377 Boechera stricta Bostr.23794s0377 I 0.712
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.712
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.712
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.712
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.712
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.712
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I 0.712
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.712
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.712