AB05030.1 (Alternaria brassicicola)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02178 (AT_hook) IPR017956 AB05030.1 T018102_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.692
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.577
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.462
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.462
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.462
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.462
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.462
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.462
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.462
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.462
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.462
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.459
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.410
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.410
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.395
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.368
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.359
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.359
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.346
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.333
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.308
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.308
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.308
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.308
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.308
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.308
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.269
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.269
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.258
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.231
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.231
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.231
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.231
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.231
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.231
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.231
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.231
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.231
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.231
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.231
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.210
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.173
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AB05030.1 AT hook 132 144
AB05030.1 AT hook 186 198

Links

Other AT hook family TFs
Other Alternaria brassicicola TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29648.m001978 Ricinus communis 29648.m001978 I
29782.m000119 Ricinus communis 29782.m000119 I
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I
Aquca_014_00308 Aquilegia coerulea Aquca_014_00308 I
AP3 Arabidopsis thaliana AT3G54340 D
PI Arabidopsis thaliana AT5G20240 D
BGIOSGA020546 Oryza indica BGIOSGA020546 I
Bo2g020730 Brassica oleracea Bo2g020730 I
Bo3g010390 Brassica oleracea Bo3g010390 I
Bo3g014100 Brassica oleracea Bo3g014100 I
Bo4g120010 Brassica oleracea Bo4g120010 I
Bo8g083600 Brassica oleracea Bo8g083600 I
Bo9g152080 Brassica oleracea Bo9g152080 I
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I
Bostr.26527s0175 Boechera stricta Bostr.26527s0175 I
Bra002285 Brassica rapa Bra002285 I
Bra006549 Brassica rapa Bra006549 I
Bra007067 Brassica rapa Bra007067 I
Bra014822 Brassica rapa Bra014822 I
Bra020093 Brassica rapa Bra020093 I
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I
Cagra.0179s0008 Capsella grandiflora Cagra.0179s0008 I
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I
Carubv10001962m.g Capsella rubella Carubv10001962m.g I
Carubv10018833m.g Capsella rubella Carubv10018833m.g I
cassava21176.m1 Manihot esculenta cassava21176.m1 I
cassava32003.m1 Manihot esculenta cassava32003.m1 I
cassava33649.m1 Manihot esculenta cassava33649.m1 I
cassava33721.m1 Manihot esculenta cassava33721.m1 I
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I
cassava41235.m1 Manihot esculenta cassava41235.m1 I
Ca_01994 Cicer arietinum Ca_01994 I
Ca_03887 Cicer arietinum Ca_03887 I
Ca_04909 Cicer arietinum Ca_04909 I
Ca_13111 Cicer arietinum Ca_13111 I
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I
Ciclev10002422m.g Citrus clementina Ciclev10002422m.g I
Ciclev10002471m.g Citrus clementina Ciclev10002471m.g I
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I
Cla021117 Citrullus lanatus Cla021117 I
Cla023547 Citrullus lanatus Cla023547 I
Cucsa.018420 Cucumis sativus Cucsa.018420 I
Cucsa.342790 Cucumis sativus Cucsa.342790 I
Eucgr.E01006 Eucalyptus grandis Eucgr.E01006 I
Eucgr.E01007 Eucalyptus grandis Eucgr.E01007 I
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I
FBP1_PETHY Petunia x hybrida FBP1_PETHY D
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I
PI Arabidopsis lyrata fgenesh2_kg.6__2063__AT5G20240.1 I
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I
gene11268-v1.0-hybrid Fragaria vesca gene11268-v1.0-hybrid I
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I
GLYMA01G37470 Glycine max GLYMA01G37470 I
GLYMA04G02980 Glycine max GLYMA04G02980 I
GLYMA04G42420 Glycine max GLYMA04G42420 I
GLYMA06G02990 Glycine max GLYMA06G02990 I
GLYMA06G12380 Glycine max GLYMA06G12380 I
GLYMA11G07820 Glycine max GLYMA11G07820 I
GLYMA13G09660 Glycine max GLYMA13G09660 I
GLYMA14G24590 Glycine max GLYMA14G24590 I
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I
GRMZM2G139073 Zea mays GRMZM2G139073 I
GSMUA_Achr3G02280_001 Musa acuminata GSMUA_Achr3G02280_001 I
GSMUA_Achr5G01230_001 Musa acuminata GSMUA_Achr5G01230_001 I
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I
LjSGA_047687.2 Lotus japonicus LjSGA_047687.2 I
LPERR06G22780 Leersia perrieri LPERR06G22780 I
Lus10010630.g Linum usitatissimum Lus10010630.g I
Lus10029719.g Linum usitatissimum Lus10029719.g I
Lus10031960.g Linum usitatissimum Lus10031960.g I
Lus10033187.g Linum usitatissimum Lus10033187.g I
Lus10042749.g Linum usitatissimum Lus10042749.g I
MADS2_PETHY Petunia x hybrida MADS2_PETHY D
MDP0000133037 Malus domestica MDP0000133037 I
MDP0000184294 Malus domestica MDP0000184294 I
MDP0000224779 Malus domestica MDP0000224779 I
MDP0000315938 Malus domestica MDP0000315938 I
mgf003143m Mimulus guttatus mgf003143m I
mgf006158m Mimulus guttatus mgf006158m I
mgf008207m Mimulus guttatus mgf008207m I
MLOC_31575 Hordeum vulgare MLOC_31575 I
MTR_1g029670 Medicago truncatula MTR_1g029670 I
MTR_3g088615 Medicago truncatula MTR_3g088615 I
MTR_3g113030 Medicago truncatula MTR_3g113030 I
MTR_5g021270 Medicago truncatula MTR_5g021270 I
OB06G35020 Oryza brachyantha OB06G35020 I
OBART06G27230 Oryza barthii OBART06G27230 I
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I
OLONG_004226 Oryza longistaminata OLONG_004226 I
OMERI06G27290 Oryza meridionalis OMERI06G27290 I
ONIVA06G29820 Oryza nivara ONIVA06G29820 I
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I
orange1.1g040096m.g Citrus sinensis orange1.1g040096m.g I
orange1.1g042044m.g Citrus sinensis orange1.1g042044m.g I
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I
MADS16 Oryza sativa OS06G0712700 D
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I
Pavir.J11672 Panicum virgatum Pavir.J11672 I
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I
PGSC0003DMG401007392 Solanum tuberosum PGSC0003DMG401007392 I
Pm004718 Prunus mume Pm004718 I
Pm006266 Prunus mume Pm006266 I
Pm018087 Prunus mume Pm018087 I
Pm026712 Prunus mume Pm026712 I
POPTR_0002s07920 Populus trichocarpa POPTR_0002s07920 I
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I
POPTR_0005s20480 Populus trichocarpa POPTR_0005s20480 I
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I
PRUPE_ppa019932mg Prunus persica PRUPE_ppa019932mg I
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D
SapurV1A.0569s0080 Salix purpurea SapurV1A.0569s0080 I
SapurV1A.0829s0180 Salix purpurea SapurV1A.0829s0180 I
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I
Sb10g029810 Sorghum bicolor Sb10g029810 I
Si007221m.g Setaria italica Si007221m.g I
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I
Solyc08g067230.2 Solanum lycopersicum Solyc08g067230.2 I
TCM_000266 Theobroma cacao TCM_000266 I
TCM_034148 Theobroma cacao TCM_034148 I
TCM_035212 Theobroma cacao TCM_035212 I
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I
Thhalv10014683m.g Eutrema salsugineum Thhalv10014683m.g I
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I
Traes_7BL_7F4124E70 Triticum aestivum Traes_7BL_7F4124E70 I
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I
TRIUR3_29719 Triticum urartu TRIUR3_29719 I
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I
PI Vitis vinifera VIT_18s0001g01760 I
AP3 Vitis vinifera VIT_18s0001g13460 I