CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_4206
(
Colletotrichum gloeosporioides
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CGGC5_4206
T032070_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01871
M01761_2.00
Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH
PBM
Weirauch et al.(2014)
pTH8618
0.843
0.782
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA36199
bHLH
199
283
SKNPHNMIEKRYRVNINEKIIALRDAVPSLRCVVQQTENPQAAAAHGDSDEAFDVVEELGGLMPARKLNKATILSKATEYITHLE
Links
Other
bHLH
family TFs
Other
Colletotrichum gloeosporioides
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29794.m003368
Ricinus communis
29794.m003368
N
SIGC
Arabidopsis lyrata
Al_scaffold_0005_2291
N
AMTR_s00056p00209700
Amborella trichopoda
AMTR_s00056p00209700
N
Aquca_001_00199
Aquilegia coerulea
Aquca_001_00199
N
SIGC
Arabidopsis thaliana
AT3G53920
N
Bo4g120510
Brassica oleracea
Bo4g120510
N
Bostr.11793s0002
Boechera stricta
Bostr.11793s0002
N
Bra014857
Brassica rapa
Bra014857
N
Cagra.2252s0020
Capsella grandiflora
Cagra.2252s0020
N
Carubv10016920m.g
Capsella rubella
Carubv10016920m.g
N
cassava18263.valid.m1
Manihot esculenta
cassava18263.valid.m1
N
Ca_14896
Cicer arietinum
Ca_14896
N
Ciclev10007968m.g
Citrus clementina
Ciclev10007968m.g
N
Eucgr.C00620
Eucalyptus grandis
Eucgr.C00620
N
gene09028-v1.0-hybrid
Fragaria vesca
gene09028-v1.0-hybrid
N
GLYMA14G22170
Glycine max
GLYMA14G22170
N
GLYMA17G26620
Glycine max
GLYMA17G26620
N
Gorai.010G103500
Gossypium raimondii
Gorai.010G103500
N
MDP0000135483
Malus domestica
MDP0000135483
N
MDP0000315125
Malus domestica
MDP0000315125
N
mgf012819m
Mimulus guttatus
mgf012819m
N
MTR_1g007370
Medicago truncatula
MTR_1g007370
N
orange1.1g009449m.g
Citrus sinensis
orange1.1g009449m.g
N
PDK_20s1533271g001
Phoenix dactylifera
PDK_20s1533271g001
N
PGSC0003DMG400025465
Solanum tuberosum
PGSC0003DMG400025465
N
PK05603.1
Cannabis sativa
PK05603.1
N
Pm005207
Prunus mume
Pm005207
N
Pm005208
Prunus mume
Pm005208
N
PRUPE_ppa003696mg
Prunus persica
PRUPE_ppa003696mg
N
SapurV1A.0890s0100
Salix purpurea
SapurV1A.0890s0100
N
Solyc08g065970.2
Solanum lycopersicum
Solyc08g065970.2
N
TCM_037242
Theobroma cacao
TCM_037242
N
Thhalv10010251m.g
Eutrema salsugineum
Thhalv10010251m.g
N
SIGC
Vitis vinifera
VIT_04s0008g00600
N