ENSLOCG00000013557 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000013557 T097741_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IKZF2
M10105_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_01 		0.768 0.859
IKZF2
M10106_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_02 		0.768 0.859
IKZF1
M08939_2.00 		Homo sapiens
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C 		0.759 0.848
Ikzf1
M08969_2.00 		Mus musculus
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C 		0.759 0.848
IKZF1
M10301_2.00 		Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN		 Transfac
Matys et al.(2006)
V$IK1_01 		0.759 0.848
IKZF1
M10302_2.00 		Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV		 Transfac
Matys et al.(2006)
V$IK2_01 		0.759 0.848
IKZF1
M10303_2.00 		Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM		 Transfac
Matys et al.(2006)
V$IK3_01 		0.759 0.848
IKZF1
M10304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5_01 		0.759 0.848
IKZF1
M10305_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5 		0.759 0.848
IKZF1
M10306_2.00 		Homo sapiens
YYTCCCARA
TYTGGGARR		 Transfac
Matys et al.(2006)
V$LYF1_01 		0.759 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000016715 C2H2 ZF 119 141
ENSLOCP00000016715 C2H2 ZF 147 169
ENSLOCP00000016715 C2H2 ZF 175 197
ENSLOCP00000016715 C2H2 ZF 203 226

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28677.m000055 Ricinus communis 28677.m000055 N
29692.m000540 Ricinus communis 29692.m000540 N
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N
GAI Arabidopsis thaliana AT1G14920 N
RGA Arabidopsis thaliana AT2G01570 N
Bo7g078550 Brassica oleracea Bo7g078550 N
Bo9g070200 Brassica oleracea Bo9g070200 N
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N
Bra017443 Brassica rapa Bra017443 N
Bra024875 Brassica rapa Bra024875 N
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N
Carubv10008833m.g Capsella rubella Carubv10008833m.g N
cassava14484.m1 Manihot esculenta cassava14484.m1 N
cassava15077.m1 Manihot esculenta cassava15077.m1 N
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I
Ca_05046 Cicer arietinum Ca_05046 N
Ca_13295 Cicer arietinum Ca_13295 I
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N
Cla003996 Citrullus lanatus Cla003996 N
Cla020062 Citrullus lanatus Cla020062 N
Cucsa.006260 Cucumis sativus Cucsa.006260 N
Cucsa.280310 Cucumis sativus Cucsa.280310 N
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N
GLYMA05G27190 Glycine max GLYMA05G27190 N
GLYMA08G10140 Glycine max GLYMA08G10140 N
GLYMA11G33720 Glycine max GLYMA11G33720 I
GLYMA18G04500 Glycine max GLYMA18G04500 I
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N
GRMZM2G144744 Zea mays GRMZM2G144744 N
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N
Lus10017626.g Linum usitatissimum Lus10017626.g N
MDP0000237978 Malus domestica MDP0000237978 N
MDP0000669451 Malus domestica MDP0000669451 I
mgf008289m Mimulus guttatus mgf008289m N
MTR_3g065980 Medicago truncatula MTR_3g065980 N
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N
PK14700.1 Cannabis sativa PK14700.1 N
Pm006304 Prunus mume Pm006304 N
Pm014329 Prunus mume Pm014329 I
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N
TCM_010965 Theobroma cacao TCM_010965 N
TCM_019165 Theobroma cacao TCM_019165 N
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N
GAI1 Vitis vinifera VIT_01s0011g05260 N
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I