Solyc01g060170.2 (Solanum lycopersicum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 Solyc01g060170.2 T163380_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.904 0.904
Q2WEL1_ORYSA
M10406_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBT_01 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g060170.2.1 CG-1 31 145

Links

Other CG-1 family TFs
Other Solanum lycopersicum TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000741 Ricinus communis 29814.m000741 I 0.000
29900.m001628 Ricinus communis 29900.m001628 I 0.000
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.000
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.000
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.000
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.000
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.000
Bo6g075950 Brassica oleracea Bo6g075950 I 0.000
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.000
Bra003346 Brassica rapa Bra003346 I 0.000
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.000
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.000
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.000
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.000
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.000
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.000
Ca_00394 Cicer arietinum Ca_00394 I 0.000
Ca_19877 Cicer arietinum Ca_19877 I 0.000
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.000
Cla002288 Citrullus lanatus Cla002288 I 0.000
Cla019967 Citrullus lanatus Cla019967 I 0.000
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.000
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.000
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.000
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.000
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.000
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.000
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.000
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.000
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.000
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.000
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.000
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.000
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.000
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.000
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.000
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.000
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.000
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.000
MDP0000301451 Malus domestica MDP0000301451 I 0.000
mgf006505m Mimulus guttatus mgf006505m I 0.000
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.000
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.000
OBART05G25610 Oryza barthii OBART05G25610 I 0.000
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.000
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.000
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.000
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.000
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.000
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.000
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.000
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.000
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.000
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.000
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.000
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.000
OS01G0674000 Oryza sativa OS01G0674000 N 0.000
OS05G0560600 Oryza sativa OS05G0560600 I 0.000
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.000
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.000
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.000
PK27986.1 Cannabis sativa PK27986.1 I 0.000
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.000
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.000
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.000
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.000
TCM_029695 Theobroma cacao TCM_029695 I 0.000
TCM_042467 Theobroma cacao TCM_042467 N 0.000
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.000
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.000
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.000
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.000
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.000