SCL21 (Arabidopsis thaliana)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 AT2G04890 T199824_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G04890.1 GRAS 50 413

Links

Other GRAS family TFs
Other Arabidopsis thaliana TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N 0.702
29949.m000124 Ricinus communis 29949.m000124 N 0.740
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.720
PAT1 Arabidopsis thaliana AT5G48150 N 0.729
Bo2g149670 Brassica oleracea Bo2g149670 N 0.734
Bo7g030310 Brassica oleracea Bo7g030310 N 0.896
Bo7g089080 Brassica oleracea Bo7g089080 N 0.711
Bo9g009240 Brassica oleracea Bo9g009240 N 0.740
Bo9g009260 Brassica oleracea Bo9g009260 N 0.729
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.970
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.731
Bra015156 Brassica rapa Bra015156 N 0.877
Bra020715 Brassica rapa Bra020715 N 0.734
Bra036185 Brassica rapa Bra036185 N 0.724
Bra037509 Brassica rapa Bra037509 N 0.706
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.940
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.732
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.951
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.732
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.738
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.742
Ca_09786 Cicer arietinum Ca_09786 N 0.729
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.732
Cla001429 Citrullus lanatus Cla001429 N 0.724
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.724
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.729
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.745
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.726
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.734
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.745
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.753
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.745
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.704
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.724
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.722
MDP0000152670 Malus domestica MDP0000152670 N 0.715
MDP0000804652 Malus domestica MDP0000804652 N 0.731
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.750
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.732
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.715
PK09018.1 Cannabis sativa PK09018.1 N 0.702
Pm015021 Prunus mume Pm015021 N 0.721
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.737
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.724
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.743
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.984
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.734
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.715
TCM_002319 Theobroma cacao TCM_002319 N 0.745
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.934
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.711
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.737