Lus10012323.g (Linum usitatissimum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Lus10012323.g T202702_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10012323 GRAS 147 518

Links

Other GRAS family TFs
Other Linum usitatissimum TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N 0.765
29949.m000124 Ricinus communis 29949.m000124 N 0.812
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.732
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.773
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.735
SCL5 Arabidopsis thaliana AT1G50600 N 0.700
SCL21 Arabidopsis thaliana AT2G04890 N 0.722
PAT1 Arabidopsis thaliana AT5G48150 N 0.770
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.705
Bo2g149670 Brassica oleracea Bo2g149670 N 0.767
Bo7g030310 Brassica oleracea Bo7g030310 N 0.708
Bo7g089080 Brassica oleracea Bo7g089080 N 0.741
Bo9g009260 Brassica oleracea Bo9g009260 N 0.765
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.728
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.765
Bra020715 Brassica rapa Bra020715 N 0.768
Bra036185 Brassica rapa Bra036185 N 0.762
Bra037509 Brassica rapa Bra037509 N 0.714
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.708
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.765
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.714
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.765
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.759
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.743
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.749
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.738
Ca_09786 Cicer arietinum Ca_09786 N 0.816
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.735
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.810
Cla001429 Citrullus lanatus Cla001429 N 0.813
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.805
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.803
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.719
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.818
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.700
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.727
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.838
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.811
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.808
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.837
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.715
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.843
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.716
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.938
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.738
MDP0000152670 Malus domestica MDP0000152670 N 0.824
MDP0000205236 Malus domestica MDP0000205236 N 0.738
MDP0000284679 Malus domestica MDP0000284679 N 0.738
MDP0000804652 Malus domestica MDP0000804652 N 0.814
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.816
OBART10G07700 Oryza barthii OBART10G07700 N 0.710
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.710
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.707
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.711
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.705
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.705
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.811
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.710
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.710
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.738
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.810
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.705
PK09018.1 Cannabis sativa PK09018.1 N 0.776
Pm012019 Prunus mume Pm012019 N 0.743
Pm015021 Prunus mume Pm015021 N 0.827
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.730
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.840
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.832
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.722
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.734
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.838
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.731
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.759
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.811
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.714
TCM_002319 Theobroma cacao TCM_002319 N 0.843
TCM_030733 Theobroma cacao TCM_030733 N 0.743
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.705
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.754
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.708
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.843
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.765