GLYMA17G10941 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA17G10941 T254223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G10941.1 MADS box 10 55
GLYMA17G10941.2 MADS box 10 55

Links

Other MADS box family TFs
Other Glycine max TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29813.m001508 Ricinus communis 29813.m001508 I 0.804
30138.m004061 Ricinus communis 30138.m004061 I 0.792
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.783
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.783
AGL65 Arabidopsis thaliana AT1G18750 D 0.771
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.783
Bo6g109050 Brassica oleracea Bo6g109050 I 0.739
Bo8g068060 Brassica oleracea Bo8g068060 I 0.870
Bo8g104060 Brassica oleracea Bo8g104060 I 0.870
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.771
Bra004393 Brassica rapa Bra004393 I 0.739
Bra016544 Brassica rapa Bra016544 I 0.870
Bra025685 Brassica rapa Bra025685 I 0.848
Bra031049 Brassica rapa Bra031049 I 0.870
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.848
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.739
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.783
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.783
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.717
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.761
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.804
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.771
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.826
Ca_16376 Cicer arietinum Ca_16376 I 0.739
Ca_18082 Cicer arietinum Ca_18082 I 0.717
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.935
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.750
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.761
Cla010361 Citrullus lanatus Cla010361 I 0.783
Cla018884 Citrullus lanatus Cla018884 I 0.739
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.739
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.761
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.792
F775_13266 Aegilops tauschii F775_13266 I 0.804
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.804
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.804
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.812
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.812
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.761
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.723
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.761
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.739
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.826
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.771
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.739
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.739
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.826
MDP0000146231 Malus domestica MDP0000146231 I 0.739
MDP0000146415 Malus domestica MDP0000146415 I 0.733
MDP0000147667 Malus domestica MDP0000147667 I 0.717
MDP0000193129 Malus domestica MDP0000193129 I 0.783
MDP0000773068 Malus domestica MDP0000773068 I 0.733
MDP0000919323 Malus domestica MDP0000919323 I 0.733
mgf000945m Mimulus guttatus mgf000945m I 0.708
mgf004425m Mimulus guttatus mgf004425m I 0.708
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.804
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.935
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.717
OBART11G21780 Oryza barthii OBART11G21780 N 0.804
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.826
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.826
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.783
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.761
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.750
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.761
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.804
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.804
OS11G0658700 Oryza sativa OS11G0658700 N 0.804
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.826
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.826
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.826
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.809
PK03147.1 Cannabis sativa PK03147.1 I 0.761
PK21701.1 Cannabis sativa PK21701.1 I 0.812
Pm006479 Prunus mume Pm006479 I 0.717
Pm024895 Prunus mume Pm024895 I 0.783
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.761
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.739
AGL33 Populus trichocarpa POPTR_0018s08400 N 0.717
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.783
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.717
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.761
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.739
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.826
Si028357m.g Setaria italica Si028357m.g N 0.761
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.739
TCM_011687 Theobroma cacao TCM_011687 I 0.761
TCM_014051 Theobroma cacao TCM_014051 I 0.848
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.870
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.717
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.739
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.826
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.804
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.804
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.804
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.804
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.771