Eucgr.C00865 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.C00865 T286790_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.741 0.745
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.741 0.745
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.741 0.745
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.741 0.745
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.737 0.809
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.709 0.766
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.709 0.766
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.692 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00865.1 Myb 5 57
Eucgr.C00865.2 Myb 5 57
Eucgr.C00865.3 Myb 5 57

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29661.m000926 Ricinus communis 29661.m000926 I 0.740
29812.m000204 Ricinus communis 29812.m000204 I
29912.m005376 Ricinus communis 29912.m005376 I 0.846
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I 0.674
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I
Aquca_060_00026 Aquilegia coerulea Aquca_060_00026 I
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.742
TRB1 Arabidopsis thaliana AT1G49950 D 0.692
TRB3 Arabidopsis thaliana AT3G49850 I 0.711
TRB2 Arabidopsis thaliana AT5G67580 D 0.741
BGIOSGA003871 Oryza indica BGIOSGA003871 I 0.717
BGIOSGA004300 Oryza indica BGIOSGA004300 I 0.737
BGIOSGA035841 Oryza indica BGIOSGA035841 I
Bo1g081300 Brassica oleracea Bo1g081300 I 0.751
Bo3g096520 Brassica oleracea Bo3g096520 I 0.711
Bo5g023860 Brassica oleracea Bo5g023860 I 0.713
Bo5g077530 Brassica oleracea Bo5g077530 I
Bo6g018740 Brassica oleracea Bo6g018740 I 0.692
Bo7g099090 Brassica oleracea Bo7g099090 I
Bo8g067280 Brassica oleracea Bo8g067280 I 0.731
Bo8g104830 Brassica oleracea Bo8g104830 I 0.731
Bo9g019040 Brassica oleracea Bo9g019040 I 0.711
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I 0.751
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.692
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I 0.751
Bra012919 Brassica rapa Bra012919 I
Bra016598 Brassica rapa Bra016598 I 0.731
Bra018818 Brassica rapa Bra018818 I 0.692
Bra024438 Brassica rapa Bra024438 I 0.711
Bra025967 Brassica rapa Bra025967 I 0.713
Bra029978 Brassica rapa Bra029978 I 0.751
Bra030992 Brassica rapa Bra030992 I 0.723
Bra037837 Brassica rapa Bra037837 I 0.711
Bra037839 Brassica rapa Bra037839 I 0.711
Bra039650 Brassica rapa Bra039650 I
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.737
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I 0.751
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.731
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.692
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I 0.751
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.692
Carubv10017722m.g Capsella rubella Carubv10017722m.g I 0.751
Carubv10026874m.g Capsella rubella Carubv10026874m.g I 0.751
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I 0.740
cassava43824.valid.m1 Manihot esculenta cassava43824.valid.m1 I 0.829
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.740
Ca_02232 Cicer arietinum Ca_02232 I
Ca_02722 Cicer arietinum Ca_02722 I 0.673
Ca_08043 Cicer arietinum Ca_08043 I
Ca_09355 Cicer arietinum Ca_09355 I
Ca_10058 Cicer arietinum Ca_10058 I 0.714
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.724
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.716
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I 0.854
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I 0.751
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.692
Cla006547 Citrullus lanatus Cla006547 I
Cla014248 Citrullus lanatus Cla014248 I
Cucsa.103240 Cucumis sativus Cucsa.103240 I
Cucsa.298390 Cucumis sativus Cucsa.298390 I
estExt_fgenesh1_pg.C_Chr_13.00010057 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_13.00010057 D
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I 0.701
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I
EuGene.1300010252 Ostreococcus RCC809 EuGene.1300010252 I
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I 0.741
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.692
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I 0.751
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.712
gene12682-v1.0-hybrid Fragaria vesca gene12682-v1.0-hybrid I 0.846
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I
GLYMA01G40220 Glycine max GLYMA01G40220 I
GLYMA05G22500 Glycine max GLYMA05G22500 I
GLYMA09G03390 Glycine max GLYMA09G03390 I
GLYMA11G05070 Glycine max GLYMA11G05070 I
GLYMA15G14320 Glycine max GLYMA15G14320 I
GLYMA17G17370 Glycine max GLYMA17G17370 I
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I 0.751
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I 0.751
GRMZM2G023667 Zea mays GRMZM2G023667 I 0.679
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.719
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.732
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.732
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.732
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.716
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.724
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I
LPERR01G18090 Leersia perrieri LPERR01G18090 I 0.717
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.737
Lus10011546.g Linum usitatissimum Lus10011546.g I 0.700
Lus10014653.g Linum usitatissimum Lus10014653.g I
Lus10019260.g Linum usitatissimum Lus10019260.g I 0.700
Lus10033775.g Linum usitatissimum Lus10033775.g I
MDP0000239354 Malus domestica MDP0000239354 I
MDP0000265359 Malus domestica MDP0000265359 I 0.846
mgf000125m Mimulus guttatus mgf000125m I
mgf004823m Mimulus guttatus mgf004823m I
mgf009594m Mimulus guttatus mgf009594m I
mgf010975m Mimulus guttatus mgf010975m I
mgf011386m Mimulus guttatus mgf011386m I 0.728
MLOC_10278 Hordeum vulgare MLOC_10278 I
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I
MTR_1g041765 Medicago truncatula MTR_1g041765 I
MTR_2g031870 Medicago truncatula MTR_2g031870 I
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.695
MTR_4g097130 Medicago truncatula MTR_4g097130 I
MTR_5g015340 Medicago truncatula MTR_5g015340 I
MTR_8g092810 Medicago truncatula MTR_8g092810 I 0.677
MTR_8g494240 Medicago truncatula MTR_8g494240 I
OB01G30760 Oryza brachyantha OB01G30760 I 0.717
OB01G37330 Oryza brachyantha OB01G37330 I 0.737
OB12G25520 Oryza brachyantha OB12G25520 I
OBART01G21150 Oryza barthii OBART01G21150 I 0.717
OBART01G28260 Oryza barthii OBART01G28260 I 0.737
OBART12G18680 Oryza barthii OBART12G18680 I
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I 0.737
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I
OLONG_008332 Oryza longistaminata OLONG_008332 I
OLONG_008666 Oryza longistaminata OLONG_008666 I 0.737
OLONG_011068 Oryza longistaminata OLONG_011068 I 0.717
OMERI01G19490 Oryza meridionalis OMERI01G19490 I 0.717
OMERI01G19510 Oryza meridionalis OMERI01G19510 I 0.717
OMERI05G07460 Oryza meridionalis OMERI05G07460 I 0.737
OMERI12G14000 Oryza meridionalis OMERI12G14000 I
ONIVA01G23780 Oryza nivara ONIVA01G23780 I 0.717
ONIVA01G32190 Oryza nivara ONIVA01G32190 I 0.737
ONIVA12G17630 Oryza nivara ONIVA12G17630 I
OPUNC01G21220 Oryza punctata OPUNC01G21220 I 0.717
OPUNC01G28080 Oryza punctata OPUNC01G28080 I 0.737
OPUNC12G16890 Oryza punctata OPUNC12G16890 I
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I 0.751
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.692
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I 0.854
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I 0.717
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I 0.737
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I 0.717
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I 0.737
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I
OS01G0589300 Oryza sativa OS01G0589300 I 0.717
OS01G0708000 Oryza sativa OS01G0708000 D 0.737
OS12G0613300 Oryza sativa OS12G0613300 I
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I 0.674
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.737
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.719
Pavir.J27218 Panicum virgatum Pavir.J27218 I
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.663
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.732
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I 0.669
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.662
PK00568.1 Cannabis sativa PK00568.1 I 0.843
PK06103.1 Cannabis sativa PK06103.1 D
PK19870.1 Cannabis sativa PK19870.1 I 0.692
Pm002374 Prunus mume Pm002374 I
Pm021139 Prunus mume Pm021139 I 0.669
Pm027209 Prunus mume Pm027209 I 0.846
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I
POPTR_0006s14940 Populus trichocarpa POPTR_0006s14940 I 0.854
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I 0.740
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I 0.700
POPTR_0018s07040 Populus trichocarpa POPTR_0018s07040 I 0.833
PRUPE_ppa007796mg Prunus persica PRUPE_ppa007796mg I 0.846
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.669
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I
SapurV1A.0087s0150 Salix purpurea SapurV1A.0087s0150 I 0.854
SapurV1A.0108s0150 Salix purpurea SapurV1A.0108s0150 I 0.854
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I 0.700
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I 0.700
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.719
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.742
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.668
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.668
Si002403m.g Setaria italica Si002403m.g I
Si002467m.g Setaria italica Si002467m.g I 0.771
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.662
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I 0.758
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I
TCM_000807 Theobroma cacao TCM_000807 I 0.751
TCM_007242 Theobroma cacao TCM_007242 I
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I 0.751
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I 0.751
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.692
Thhalv10011866m.g Eutrema salsugineum Thhalv10011866m.g I
Thhalv10012087m.g Eutrema salsugineum Thhalv10012087m.g I
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.709
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.737
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.737
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I
TRIUR3_08672 Triticum urartu TRIUR3_08672 I
TRIUR3_10613 Triticum urartu TRIUR3_10613 I
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I
TRB1 Vitis vinifera VIT_03s0091g01030 I
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I
VIT_11s0016g01890 Vitis vinifera VIT_11s0016g01890 I 0.835