CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g14817
(
Steinernema scapterisci
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L892_g14817
T309181_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.780
0.507
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g14817.t1
Nuclear receptor
18
85
AICQICGAPAHGIHFQAVACRACAAFFRRSAEASGRYKCRRVTEDCNVTKINCRFCRLKKCHSEGMTL
Links
Other
Nuclear receptor
family TFs
Other
Steinernema scapterisci
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
0.817
ANCCEY_13226
Ancylostoma ceylanicum
ANCCEY_13226
I
0.822
CBG09567
Caenorhabditis briggsae
CBG09567
I
0.784
CBG15881
Caenorhabditis briggsae
CBG15881
I
0.792
CRE05044
Caenorhabditis remanei
CRE05044
I
0.769
CRE30948
Caenorhabditis remanei
CRE30948
I
0.835
HCOI00483700
Haemonchus contortus
HCOI00483700
I
0.822
HCOI01190000
Haemonchus contortus
HCOI01190000
I
0.878
HPLM_0000277901
Haemonchus placei
HPLM_0000277901
I
0.822
HPLM_0000974301
Haemonchus placei
HPLM_0000974301
I
0.878
L596_g14532
Steinernema carpocapsae
L596_g14532
I
0.823
L596_g14533
Steinernema carpocapsae
L596_g14533
I
0.825
L596_g14536
Steinernema carpocapsae
L596_g14536
I
0.954
L596_g14537
Steinernema carpocapsae
L596_g14537
I
0.821
L596_g14541
Steinernema carpocapsae
L596_g14541
N
0.868
L596_g14578
Steinernema carpocapsae
L596_g14578
N
0.761
L596_g14588
Steinernema carpocapsae
L596_g14588
I
0.850
L596_g14590
Steinernema carpocapsae
L596_g14590
I
0.780
L596_g14596
Steinernema carpocapsae
L596_g14596
I
0.766
L889_g6692
Steinernema feltiae
L889_g6692
I
0.766
L889_g6694
Steinernema feltiae
L889_g6694
I
0.786
L889_g6695
Steinernema feltiae
L889_g6695
I
0.810
L889_g6792
Steinernema feltiae
L889_g6792
I
0.896
L889_g6797
Steinernema feltiae
L889_g6797
I
0.878
L889_g6798
Steinernema feltiae
L889_g6798
I
0.905
L889_g6799
Steinernema feltiae
L889_g6799
I
0.881
L889_g6803
Steinernema feltiae
L889_g6803
N
0.781
L889_g6804
Steinernema feltiae
L889_g6804
I
0.806
L889_g8185
Steinernema feltiae
L889_g8185
I
0.848
L889_g8187
Steinernema feltiae
L889_g8187
I
0.824
L892_g10840
Steinernema scapterisci
L892_g10840
N
0.785
L892_g10842
Steinernema scapterisci
L892_g10842
I
0.825
L892_g10843
Steinernema scapterisci
L892_g10843
I
0.784
L892_g14818
Steinernema scapterisci
L892_g14818
I
0.817
L892_g14824
Steinernema scapterisci
L892_g14824
N
0.860
L892_g14825
Steinernema scapterisci
L892_g14825
I
0.766
L892_g2780
Steinernema scapterisci
L892_g2780
I
0.759
L892_g2781
Steinernema scapterisci
L892_g2781
I
0.753
L892_g2782
Steinernema scapterisci
L892_g2782
I
0.848
L893_g18992
Steinernema glaseri
L893_g18992
I
0.762
L893_g18993
Steinernema glaseri
L893_g18993
I
0.930
L893_g27930
Steinernema glaseri
L893_g27930
I
0.830
L893_g27935
Steinernema glaseri
L893_g27935
N
0.791
L893_g27943
Steinernema glaseri
L893_g27943
N
0.782
L898_g12799
Steinernema monticolum
L898_g12799
I
0.811
L898_g19012
Steinernema monticolum
L898_g19012
I
0.866
L898_g19014
Steinernema monticolum
L898_g19014
I
0.881
L898_g19019
Steinernema monticolum
L898_g19019
I
0.906
L898_g19021
Steinernema monticolum
L898_g19021
I
0.781
L898_g20180
Steinernema monticolum
L898_g20180
I
0.835
L898_g21763
Steinernema monticolum
L898_g21763
I
0.932
L898_g2943
Steinernema monticolum
L898_g2943
N
0.861
L898_g2944
Steinernema monticolum
L898_g2944
N
0.836
L898_g32142
Steinernema monticolum
L898_g32142
N
0.762
L898_g3514
Steinernema monticolum
L898_g3514
I
0.773
L898_g3515
Steinernema monticolum
L898_g3515
I
0.796
L898_g4012
Steinernema monticolum
L898_g4012
I
0.827
L898_g4013
Steinernema monticolum
L898_g4013
I
0.862
L898_g4015
Steinernema monticolum
L898_g4015
N
0.875
L898_g4016
Steinernema monticolum
L898_g4016
N
0.798
NBR_0001218401
Nippostrongylus brasiliensis
NBR_0001218401
I
0.826
PEQ_0000560101
Parascaris equorum
PEQ_0000560101
I
0.758
PTRK_0001404900
Parastrongyloides trichosuri
PTRK_0001404900
N
0.754
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
0.820
SVE_1003800
Strongyloides venezuelensis
SVE_1003800
N
0.783
SVUK_0002058501
Strongylus vulgaris
SVUK_0002058501
I
0.778
nhr-232
Caenorhabditis elegans
WBGene00012494
D
0.780