Pvit_04251 (Pogona vitticeps)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Pvit_04251 T317813_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.923 0.923
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.923 0.923
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.923 0.923
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.923 0.923
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.923 0.923
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.923 0.923
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.923 0.923
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.923 0.923
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.923 0.923
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.867 0.867
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.867 0.867
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.867 0.867
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.867 0.867
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.867 0.867
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.867 0.867
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.867 0.867
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.867 0.867
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.867 0.867
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.867 0.867
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.867 0.867
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.825 0.825
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.825 0.825
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.811 0.811
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.811 0.811
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.811 0.811
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.811 0.811
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.811 0.811
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.811 0.811
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.811 0.811
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.811 0.811
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.811 0.811
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.811 0.811
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.811 0.811
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.811 0.811
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.804 0.804
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.769 0.769
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.769 0.769
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.769 0.769
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.769 0.769
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.769 0.769
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.769 0.769
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.769 0.769
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.769 0.769
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.769 0.769
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.769 0.769
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.769 0.769
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.769 0.769
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.769 0.769
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.769 0.769
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.769 0.769
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_04251 Rel 380 539

Links

Other Rel family TFs
Other Pogona vitticeps TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004652 Ricinus communis 29848.m004652 N
OCP3 Arabidopsis thaliana AT5G11270 N
BGIOSGA023211 Oryza indica BGIOSGA023211 N
Bo9g171420 Brassica oleracea Bo9g171420 N
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N
Bra008975 Brassica rapa Bra008975 N
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N
Carubv10002492m.g Capsella rubella Carubv10002492m.g N
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N
Cla021272 Citrullus lanatus Cla021272 N
Cucsa.310460 Cucumis sativus Cucsa.310460 N
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N
GRMZM2G163641 Zea mays GRMZM2G163641 N
LPERR06G16850 Leersia perrieri LPERR06G16850 N
MDP0000119866 Malus domestica MDP0000119866 N
MDP0000202143 Malus domestica MDP0000202143 N
mgf000632m Mimulus guttatus mgf000632m N
MLOC_45474 Hordeum vulgare MLOC_45474 N
OB06G27850 Oryza brachyantha OB06G27850 N
OBART06G20210 Oryza barthii OBART06G20210 N
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N
OLONG_013537 Oryza longistaminata OLONG_013537 N
OMERI06G20820 Oryza meridionalis OMERI06G20820 N
ONIVA06G23990 Oryza nivara ONIVA06G23990 N
OPUNC06G18430 Oryza punctata OPUNC06G18430 N
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N
OS06G0601000 Oryza sativa OS06G0601000 N
Pavir.Da00552 Panicum virgatum Pavir.Da00552 N
Pavir.Db01233 Panicum virgatum Pavir.Db01233 N
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N
PK00680.1 Cannabis sativa PK00680.1 N
Pm004594 Prunus mume Pm004594 N
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N
Sb10g023400 Sorghum bicolor Sb10g023400 N
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N
TCM_038389 Theobroma cacao TCM_038389 N
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N
OCP3 Vitis vinifera VIT_04s0008g05190 N