e_gw1.3.1365.1 (Cryphonectria parasitica)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 e_gw1.3.1365.1 T391096_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU08658
M02628_2.00 		Neurospora crassa
NYCGGBWAN
NTWVCCGRN		 PBM
Weirauch et al.(2014)
pTH7896 		0.601 0.743
ANIA_06846
M01390_2.00 		Aspergillus nidulans
VTCGGYTA
TARCCGAB		 PBM
Lambert et al.(2019)
pEX0258 		0.545 0.486
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.3.1365.1 Zinc cluster 35 69

Links

Other Zinc cluster family TFs
Other Cryphonectria parasitica TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29900.m001628 Ricinus communis 29900.m001628 I 0.000
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.000
Bo6g075950 Brassica oleracea Bo6g075950 I 0.000
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.000
Bra003346 Brassica rapa Bra003346 I 0.000
Bra034165 Brassica rapa Bra034165 I 0.000
Bra034866 Brassica rapa Bra034866 I 0.000
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.000
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.000
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.000
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.000
Ca_00394 Cicer arietinum Ca_00394 I 0.000
Ca_19877 Cicer arietinum Ca_19877 I 0.000
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.000
Cla009854 Citrullus lanatus Cla009854 I 0.000
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.000
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.000
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.000
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.000
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.000
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.000
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.000
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.000
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.000
MDP0000301451 Malus domestica MDP0000301451 I 0.000
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.000
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.000
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.000
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.000
PK27986.1 Cannabis sativa PK27986.1 I 0.000
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.000
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.000
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.000
SapurV1A.0045s0480 Salix purpurea SapurV1A.0045s0480 I 0.000
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.000
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.000
TCM_029695 Theobroma cacao TCM_029695 I 0.000
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.000
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.000
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.000