LPERR03G04860 (Leersia perrieri)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 LPERR03G04860 T002567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.804 0.920
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.755 0.840
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.682 0.780
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.679 0.780
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.679 0.780
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.679 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.677 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR03G04860.1 AP2 26 77

Links

Other AP2 family TFs
Other Leersia perrieri TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2D Arabidopsis thaliana AT1G75490 D 0.679
DREB2F Arabidopsis thaliana AT3G57600 D 0.755
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.682
PK07402.1 Cannabis sativa PK07402.1 D 0.677
PK08602.1 Cannabis sativa PK08602.1 D 0.804
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.807
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.706
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.817
Bo4g111040 Brassica oleracea Bo4g111040 I 0.742
Bo6g073020 Brassica oleracea Bo6g073020 I 0.759
Bo6g086320 Brassica oleracea Bo6g086320 I 0.682
Bo6g119660 Brassica oleracea Bo6g119660 I 0.679
Bo8g092010 Brassica oleracea Bo8g092010 I 0.758
Bra003752 Brassica rapa Bra003752 I 0.682
Bra007341 Brassica rapa Bra007341 I 0.758
Bra014617 Brassica rapa Bra014617 I 0.742
Bra015840 Brassica rapa Bra015840 I 0.679
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.817
F775_05774 Aegilops tauschii F775_05774 I 0.682
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.679
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.755
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.817
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.814
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.817
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.811
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.770
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.814
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.798
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.817
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.817
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.678
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.682
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.680
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.682
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.677
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.814
OBART03G05550 Oryza barthii OBART03G05550 I 0.817
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.817
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.817
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.817
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.817
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.817
DREB2E Oryza sativa OS03G0174400 I 0.817
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.814
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.687
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.795
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.677
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.814
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.823
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.684
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.766
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.709
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.709
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.766
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.762
TCM_024756 Theobroma cacao TCM_024756 I 0.805
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.682
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.682
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.807
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.682
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.814
Ca_07264 Cicer arietinum Ca_07264 I 0.814
Cla017778 Citrullus lanatus Cla017778 I 0.780
Pm003634 Prunus mume Pm003634 I 0.684
Pm025865 Prunus mume Pm025865 I 0.823
27810.m000639 Ricinus communis 27810.m000639 I 0.814
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.814
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.814
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.773
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.760
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.751
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.688
mgf017629m Mimulus guttatus mgf017629m I 0.703
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.804
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.755
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.679
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.755
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.679
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.755
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.679
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.805
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.791
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.689
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.797
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.689
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.814
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.813
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.806
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.806
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.679
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.695
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.695
MDP0000250927 Malus domestica MDP0000250927 I 0.680
MDP0000703626 Malus domestica MDP0000703626 I 0.823
MDP0000871361 Malus domestica MDP0000871361 I 0.823
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.805
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.817
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.817
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.814
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.789
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.691
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.691
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.749
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.679
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.775