CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TSHZ3
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000010680
T104563_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000016086
C2H2 ZF
213
237
FRCKDCSAAYDTLVELTVHMNETGH
ENSOPRP00000016086
C2H2 ZF
274
298
LKCMYCGHSFESLQDLSVHMIKTKH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRB1
Arabidopsis thaliana
AT1G49950
D
AT1G72740
Arabidopsis thaliana
AT1G72740
D
TRB2
Arabidopsis thaliana
AT5G67580
D
PK06103.1
Cannabis sativa
PK06103.1
D
AMTR_s00007p00193000
Amborella trichopoda
AMTR_s00007p00193000
I
AMTR_s00036p00166880
Amborella trichopoda
AMTR_s00036p00166880
I
AT1G17520
Arabidopsis thaliana
AT1G17520
I
TRB3
Arabidopsis thaliana
AT3G49850
I
BGIOSGA003871
Oryza indica
BGIOSGA003871
I
BGIOSGA035841
Oryza indica
BGIOSGA035841
I
Bo1g081300
Brassica oleracea
Bo1g081300
I
Bo3g096520
Brassica oleracea
Bo3g096520
I
Bo5g023860
Brassica oleracea
Bo5g023860
I
Bo6g018740
Brassica oleracea
Bo6g018740
I
Bo8g067280
Brassica oleracea
Bo8g067280
I
Bo9g019040
Brassica oleracea
Bo9g019040
I
Bra016598
Brassica rapa
Bra016598
I
Bra018818
Brassica rapa
Bra018818
I
Bra024438
Brassica rapa
Bra024438
I
Bra025967
Brassica rapa
Bra025967
I
Bra029978
Brassica rapa
Bra029978
I
Bra037837
Brassica rapa
Bra037837
I
Bra037839
Brassica rapa
Bra037839
I
BRADI2G42240
Brachypodium distachyon
BRADI2G42240
I
BRADI4G01770
Brachypodium distachyon
BRADI4G01770
I
TRB2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002157
I
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
TRB3
Arabidopsis lyrata
fgenesh2_kg.5__1337__AT3G49850.1
I
GLYMA01G40220
Glycine max
GLYMA01G40220
I
GLYMA05G22500
Glycine max
GLYMA05G22500
I
GLYMA09G03390
Glycine max
GLYMA09G03390
I
GLYMA11G05070
Glycine max
GLYMA11G05070
I
GLYMA15G14320
Glycine max
GLYMA15G14320
I
GLYMA17G17370
Glycine max
GLYMA17G17370
I
GRMZM2G087817
Zea mays
GRMZM2G087817
I
GRMZM2G136887
Zea mays
GRMZM2G136887
I
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
GSMUA_Achr4G08670_001
Musa acuminata
GSMUA_Achr4G08670_001
I
GSMUA_Achr4G09130_001
Musa acuminata
GSMUA_Achr4G09130_001
I
GSMUA_Achr6G30000_001
Musa acuminata
GSMUA_Achr6G30000_001
I
GSMUA_Achr6G31260_001
Musa acuminata
GSMUA_Achr6G31260_001
I
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
GSMUA_Achr8G24960_001
Musa acuminata
GSMUA_Achr8G24960_001
I
LPERR01G18090
Leersia perrieri
LPERR01G18090
I
MLOC_10278
Hordeum vulgare
MLOC_10278
I
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
MTR_1g041765
Medicago truncatula
MTR_1g041765
I
MTR_2g031870
Medicago truncatula
MTR_2g031870
I
MTR_4g097130
Medicago truncatula
MTR_4g097130
I
MTR_5g015340
Medicago truncatula
MTR_5g015340
I
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
OB01G30760
Oryza brachyantha
OB01G30760
I
OB12G25520
Oryza brachyantha
OB12G25520
I
OBART01G21150
Oryza barthii
OBART01G21150
I
OBART12G18680
Oryza barthii
OBART12G18680
I
OGLUM12G20330
Oryza glumaepatula
OGLUM12G20330
I
OLONG_008332
Oryza longistaminata
OLONG_008332
I
OMERI01G19490
Oryza meridionalis
OMERI01G19490
I
OMERI01G19510
Oryza meridionalis
OMERI01G19510
I
ONIVA01G23780
Oryza nivara
ONIVA01G23780
I
ONIVA12G17630
Oryza nivara
ONIVA12G17630
I
OPUNC01G21220
Oryza punctata
OPUNC01G21220
I
OPUNC12G16890
Oryza punctata
OPUNC12G16890
I
ORGLA01G0168300
Oryza glaberrima
ORGLA01G0168300
I
ORGLA12G0159400
Oryza glaberrima
ORGLA12G0159400
I
ORUFI01G23880
Oryza rufipogon
ORUFI01G23880
I
ORUFI12G20880
Oryza rufipogon
ORUFI12G20880
I
OS01G0589300
Oryza sativa
OS01G0589300
I
OS12G0613300
Oryza sativa
OS12G0613300
I
OSTLU_27049
Ostreococcus lucimarinus
OSTLU_27049
I
PGSC0003DMG400023131
Solanum tuberosum
PGSC0003DMG400023131
I
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
POPTR_0006s14940
Populus trichocarpa
POPTR_0006s14940
I
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
POPTR_0014s01010
Populus trichocarpa
POPTR_0014s01010
I
POPTR_0018s07040
Populus trichocarpa
POPTR_0018s07040
I
PRUPE_ppa007796mg
Prunus persica
PRUPE_ppa007796mg
I
PRUPE_ppa009220mg
Prunus persica
PRUPE_ppa009220mg
I
PRUPE_ppa011492mg
Prunus persica
PRUPE_ppa011492mg
I
Sb03g026470
Sorghum bicolor
Sb03g026470
I
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
SELMODRAFT_413266
Selaginella moellendorffii
SELMODRAFT_413266
I
SELMODRAFT_426759
Selaginella moellendorffii
SELMODRAFT_426759
I
SELMODRAFT_443975
Selaginella moellendorffii
SELMODRAFT_443975
I
SELMODRAFT_49296
Selaginella moellendorffii
SELMODRAFT_49296
I
SELMODRAFT_49297
Selaginella moellendorffii
SELMODRAFT_49297
I
SELMODRAFT_49312
Selaginella moellendorffii
SELMODRAFT_49312
I
Si002403m.g
Setaria italica
Si002403m.g
I
Solyc01g106940.2
Solanum lycopersicum
Solyc01g106940.2
I
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
Solyc11g044320.1
Solanum lycopersicum
Solyc11g044320.1
I
TCM_000807
Theobroma cacao
TCM_000807
I
TCM_007242
Theobroma cacao
TCM_007242
I
Traes_3AL_CF481F6AC
Triticum aestivum
Traes_3AL_CF481F6AC
I
TRAES3BF118300070CFD_g
Triticum aestivum
TRAES3BF118300070CFD_g
I
Traes_5AS_8756ECB5A
Triticum aestivum
Traes_5AS_8756ECB5A
I
Traes_5BS_EB206B8BC
Triticum aestivum
Traes_5BS_EB206B8BC
I
Traes_5DS_3EE830A43
Triticum aestivum
Traes_5DS_3EE830A43
I
TRIUR3_08672
Triticum urartu
TRIUR3_08672
I
TRIUR3_10613
Triticum urartu
TRIUR3_10613
I
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
TRB1
Vitis vinifera
VIT_03s0091g01030
I
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I
VIT_11s0016g01890
Vitis vinifera
VIT_11s0016g01890
I
Ca_02232
Cicer arietinum
Ca_02232
I
Ca_08043
Cicer arietinum
Ca_08043
I
Ca_09355
Cicer arietinum
Ca_09355
I
Cla006547
Citrullus lanatus
Cla006547
I
Cla014248
Citrullus lanatus
Cla014248
I
Pm002374
Prunus mume
Pm002374
I
Pm021139
Prunus mume
Pm021139
I
Pm027209
Prunus mume
Pm027209
I
29661.m000926
Ricinus communis
29661.m000926
I
29812.m000204
Ricinus communis
29812.m000204
I
29912.m005376
Ricinus communis
29912.m005376
I
cassava19326.valid.m1
Manihot esculenta
cassava19326.valid.m1
I
cassava37744.valid.m1
Manihot esculenta
cassava37744.valid.m1
I
cassava43824.valid.m1
Manihot esculenta
cassava43824.valid.m1
I
cassava7508.valid.m1
Manihot esculenta
cassava7508.valid.m1
I
Cucsa.103240
Cucumis sativus
Cucsa.103240
I
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
gw1.1.287.1
Physcomitrella patens
gw1.1.287.1
I
gw1.176.27.1
Physcomitrella patens
gw1.176.27.1
I
mgf000125m
Mimulus guttatus
mgf000125m
I
mgf004823m
Mimulus guttatus
mgf004823m
I
mgf009594m
Mimulus guttatus
mgf009594m
I
mgf010975m
Mimulus guttatus
mgf010975m
I
mgf011386m
Mimulus guttatus
mgf011386m
I
Aquca_001_00028
Aquilegia coerulea
Aquca_001_00028
I
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
Aquca_060_00026
Aquilegia coerulea
Aquca_060_00026
I
Bostr.0568s0184
Boechera stricta
Bostr.0568s0184
I
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
Bostr.6864s0256
Boechera stricta
Bostr.6864s0256
I
Cagra.0342s0046
Capsella grandiflora
Cagra.0342s0046
I
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
Cagra.4491s0006
Capsella grandiflora
Cagra.4491s0006
I
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
Carubv10017722m.g
Capsella rubella
Carubv10017722m.g
I
Carubv10026874m.g
Capsella rubella
Carubv10026874m.g
I
Ciclev10009173m.g
Citrus clementina
Ciclev10009173m.g
I
Ciclev10026089m.g
Citrus clementina
Ciclev10026089m.g
I
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
Eucgr.C00865
Eucalyptus grandis
Eucgr.C00865
I
Eucgr.H02312
Eucalyptus grandis
Eucgr.H02312
I
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
evm.TU.supercontig_25.81
Carica papaya
evm.TU.supercontig_25.81
I
gene05764-v1.0-hybrid
Fragaria vesca
gene05764-v1.0-hybrid
I
gene12682-v1.0-hybrid
Fragaria vesca
gene12682-v1.0-hybrid
I
gene25445-v1.0-hybrid
Fragaria vesca
gene25445-v1.0-hybrid
I
Gorai.003G030800
Gossypium raimondii
Gorai.003G030800
I
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
Gorai.007G224200
Gossypium raimondii
Gorai.007G224200
I
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
Lus10011546.g
Linum usitatissimum
Lus10011546.g
I
Lus10012092.g
Linum usitatissimum
Lus10012092.g
I
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
Lus10019260.g
Linum usitatissimum
Lus10019260.g
I
Lus10025203.g
Linum usitatissimum
Lus10025203.g
I
Lus10027621.g
Linum usitatissimum
Lus10027621.g
I
Lus10030935.g
Linum usitatissimum
Lus10030935.g
I
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
Lus10040111.g
Linum usitatissimum
Lus10040111.g
I
MDP0000234807
Malus domestica
MDP0000234807
I
MDP0000239354
Malus domestica
MDP0000239354
I
MDP0000265359
Malus domestica
MDP0000265359
I
orange1.1g020653m.g
Citrus sinensis
orange1.1g020653m.g
I
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
orange1.1g024128m.g
Citrus sinensis
orange1.1g024128m.g
I
Pavir.Ea02064
Panicum virgatum
Pavir.Ea02064
I
Pavir.J27218
Panicum virgatum
Pavir.J27218
I
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
SapurV1A.0087s0150
Salix purpurea
SapurV1A.0087s0150
I
SapurV1A.0108s0150
Salix purpurea
SapurV1A.0108s0150
I
SapurV1A.0235s0100
Salix purpurea
SapurV1A.0235s0100
I
SapurV1A.1368s0050
Salix purpurea
SapurV1A.1368s0050
I
Thhalv10004691m.g
Eutrema salsugineum
Thhalv10004691m.g
I
Thhalv10010562m.g
Eutrema salsugineum
Thhalv10010562m.g
I
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
Thhalv10018950m.g
Eutrema salsugineum
Thhalv10018950m.g
I
PK00568.1
Cannabis sativa
PK00568.1
I
PK19870.1
Cannabis sativa
PK19870.1
I
chr2.LjT13P17.300.nd
Lotus japonicus
chr2.LjT13P17.300.nd
I
chr3.LjT02L14.30.nd
Lotus japonicus
chr3.LjT02L14.30.nd
I
LjSGA_016825.2
Lotus japonicus
LjSGA_016825.2
I
LjSGA_029815.1
Lotus japonicus
LjSGA_029815.1
I
LjT25P15.150.nd
Lotus japonicus
LjT25P15.150.nd
I
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
PDK_20s1467521g002
Phoenix dactylifera
PDK_20s1467521g002
I