ZNF408 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000023097 T110488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000023673 C2H2 ZF 358 380
ENSSSCP00000023673 C2H2 ZF 386 408
ENSSSCP00000023673 C2H2 ZF 414 436
ENSSSCP00000023673 C2H2 ZF 442 464
ENSSSCP00000023673 C2H2 ZF 473 495
ENSSSCP00000023673 C2H2 ZF 501 523
ENSSSCP00000023673 C2H2 ZF 529 551
ENSSSCP00000023673 C2H2 ZF 556 578
ENSSSCP00000023673 C2H2 ZF 584 606
ENSSSCP00000023673 C2H2 ZF 612 634

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.000
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.000
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.000
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.000
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.000
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.000
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.000
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.000
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.000
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.000
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.000
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.000
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.000
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.000
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.000
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.000
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.000
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.000
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.000
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.000
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.000
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.000
Bo3g179450 Brassica oleracea Bo3g179450 N 0.000
Bo6g022200 Brassica oleracea Bo6g022200 N 0.000
Bra018848 Brassica rapa Bra018848 N 0.000
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.000
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.000
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.000
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.000
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.000
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.000
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.000
SCL3 Arabidopsis thaliana AT1G50420 N 0.000
TCM_040833 Theobroma cacao TCM_040833 N 0.000
TCM_042392 Theobroma cacao TCM_042392 N 0.000
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.000
Ca_11133 Cicer arietinum Ca_11133 N 0.000
Ca_27441 Cicer arietinum Ca_27441 N 0.000
Cla006433 Citrullus lanatus Cla006433 N 0.000
Pm012190 Prunus mume Pm012190 N 0.000
30024.m001746 Ricinus communis 30024.m001746 N 0.000
30131.m007244 Ricinus communis 30131.m007244 N 0.000