mgf015980m (Mimulus guttatus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 mgf015980m T165408_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CSP4
M01902_2.00 		Arabidopsis thaliana
AAWAAAAM
KTTTTWTT		 PBM
Weirauch et al.(2014)
pTH7494 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf015980m CSD 7 73

Links

Other CSD family TFs
Other Mimulus guttatus TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CSP4 Arabidopsis thaliana AT2G21060 D 0.727
CSP2 Arabidopsis thaliana AT4G38680 I 0.712
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.712
Cagra.2961s0009 Capsella grandiflora Cagra.2961s0009 I 0.727
Bostr.25542s0051 Boechera stricta Bostr.25542s0051 I 0.727
Pm020837 Prunus mume Pm020837 I 0.742
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.818
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.742
GRP2 Arabidopsis lyrata scaffold_700059.1 I 0.712
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.773
ATGRP2B Arabidopsis lyrata fgenesh2_kg.4__14__AT2G21060.1 I 0.712
Bra031159 Brassica rapa Bra031159 I 0.712
Bo8g102040 Brassica oleracea Bo8g102040 I 0.712
Bo3g141510 Brassica oleracea Bo3g141510 I 0.712
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.727
AZW_EuGene.0000110131 Micromonas pusilla AZW_EuGene.0000110131 N 0.742
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.742
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.788
estExt_gwp_gw1.C_410063 Physcomitrella patens estExt_gwp_gw1.C_410063 N 0.712
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 0.712
mgf001526m Mimulus guttatus mgf001526m N 0.894
mgf014458m Mimulus guttatus mgf014458m N 0.894
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.712
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.727
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.727
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.727
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.712
BGIOSGA007226 Oryza indica BGIOSGA007226 N 0.727
Lus10025058.g Linum usitatissimum Lus10025058.g N 0.712
MDP0000155077 Malus domestica MDP0000155077 N 0.758
MDP0000202739 Malus domestica MDP0000202739 N 0.758
MDP0000225222 Malus domestica MDP0000225222 N 0.742
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.758
Pavir.J33349 Panicum virgatum Pavir.J33349 N 0.758
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.758
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.773
PK03316.1 Cannabis sativa PK03316.1 N 0.712
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.803
chr6.CM0045.280.nd Lotus japonicus chr6.CM0045.280.nd N 0.773
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.727
EMIHUDRAFT_78118 Emiliania huxleyi EMIHUDRAFT_78118 N 0.712
OS02G0121100 Oryza sativa OS02G0121100 N 0.727
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.727
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.773
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.788
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.758
GRMZM5G895313 Zea mays GRMZM5G895313 N 0.727
LPERR02G01370 Leersia perrieri LPERR02G01370 N 0.712
OBART02G01600 Oryza barthii OBART02G01600 N 0.727
OGLUM02G01470 Oryza glumaepatula OGLUM02G01470 N 0.727
OMERI02G00930 Oryza meridionalis OMERI02G00930 N 0.727
ONIVA02G01490 Oryza nivara ONIVA02G01490 N 0.727
OPUNC02G01060 Oryza punctata OPUNC02G01060 N 0.727
ORGLA02G0014700 Oryza glaberrima ORGLA02G0014700 N 0.727
ORUFI02G01580 Oryza rufipogon ORUFI02G01580 N 0.727
Ca_11038 Cicer arietinum Ca_11038 N 0.742
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.742
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.727
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.742
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.773
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.758
BRADI2G07090 Brachypodium distachyon BRADI2G07090 N 0.727
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N 0.727
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.773
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.742
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.758
TRIUR3_31144 Triticum urartu TRIUR3_31144 N 0.712
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.727
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.712