foxn1 (Danio rerio)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSDARG00000011879 T185501_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXN1
M10531_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WHN_B 		0.822 0.884
Foxn1
M01010_2.00 		Mus musculus
NAHRCNNNNN
NNNNNGYDTN		 PBM
Nakagawa et al.(2013)
Foxn1 		0.822 0.872
Foxn4
M01011_2.00 		Mus musculus
NNNVACGCNN
NNGCGTBNNN		 PBM
Nakagawa et al.(2013)
Foxn4 		0.814 0.837
jumu
M01012_2.00 		Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN		 PBM
Nakagawa et al.(2013)
Jumeau 		0.718 0.698
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000005855 Forkhead 220 310

Links

Other Forkhead family TFs
Other Danio rerio TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G58630 Arabidopsis thaliana AT3G58630 D
Ca_19877 Cicer arietinum Ca_19877 I
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I
mgf006505m Mimulus guttatus mgf006505m I
Cucsa.213120 Cucumis sativus Cucsa.213120 I
Cucsa.213110 Cucumis sativus Cucsa.213110 I
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I
cassava21220.m1 Manihot esculenta cassava21220.m1 I
29900.m001628 Ricinus communis 29900.m001628 I
Cla019967 Citrullus lanatus Cla019967 I
Cla002288 Citrullus lanatus Cla002288 I
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I
Ca_00394 Cicer arietinum Ca_00394 I
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I
TCM_029695 Theobroma cacao TCM_029695 I
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I
Si022565m.g Setaria italica Si022565m.g I
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I
Lus10025404.g Linum usitatissimum Lus10025404.g I
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I
PK27986.1 Cannabis sativa PK27986.1 I
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I
Pavir.J33948 Panicum virgatum Pavir.J33948 I
Pavir.J11649 Panicum virgatum Pavir.J11649 I
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I
MDP0000301451 Malus domestica MDP0000301451 I
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I
Lus10015282.g Linum usitatissimum Lus10015282.g I
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I
Carubv10017646m.g Capsella rubella Carubv10017646m.g I
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I
GLYMA13G30280 Glycine max GLYMA13G30280 I
GLYMA15G08890 Glycine max GLYMA15G08890 I
GLYMA12G33850 Glycine max GLYMA12G33850 I
GRMZM2G157219 Zea mays GRMZM2G157219 I
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I
MTR_2g016140 Medicago truncatula MTR_2g016140 I
MTR_4g079960 Medicago truncatula MTR_4g079960 I
OBART05G25610 Oryza barthii OBART05G25610 I
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I
OMERI02G35600 Oryza meridionalis OMERI02G35600 I
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I
ONIVA05G26860 Oryza nivara ONIVA05G26860 I
Bra003346 Brassica rapa Bra003346 I
OPUNC05G23220 Oryza punctata OPUNC05G23220 I
Bo6g075950 Brassica oleracea Bo6g075950 I
BGIOSGA020351 Oryza indica BGIOSGA020351 I
BGIOSGA020349 Oryza indica BGIOSGA020349 I
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I
OS05G0560600 Oryza sativa OS05G0560600 I
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N
BGIOSGA001035 Oryza indica BGIOSGA001035 N
Lus10025406.g Linum usitatissimum Lus10025406.g N
Lus10007273.g Linum usitatissimum Lus10007273.g N
GRMZM2G023119 Zea mays GRMZM2G023119 N
LPERR01G22430 Leersia perrieri LPERR01G22430 N
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N
OMERI01G23900 Oryza meridionalis OMERI01G23900 N
ONIVA01G29560 Oryza nivara ONIVA01G29560 N
OPUNC01G26130 Oryza punctata OPUNC01G26130 N
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N
TCM_042467 Theobroma cacao TCM_042467 N
OS01G0674000 Oryza sativa OS01G0674000 N