cassava20989.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava20989.m1 T202063_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava20989.m1 GRAS 45 465

Links

Other GRAS family TFs
Other Manihot esculenta TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.779
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.725
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.799
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.766
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.710
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.708
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.736
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.850
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.744
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.799
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.812
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.741
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.766
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.751
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.811
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.751
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.704
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.733
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.738
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.755
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.840
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.736
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.820
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.726
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.864
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.856
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.705
PK02707.1 Cannabis sativa PK02707.1 N 0.774
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.741
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.738
TCM_040833 Theobroma cacao TCM_040833 N 0.783
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.705
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.735
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.730
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.707
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.738
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.712
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.713
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.880
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.830
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.723
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.747
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.783
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.705
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.704
SCL3 Arabidopsis thaliana AT1G50420 N 0.713
TCM_042392 Theobroma cacao TCM_042392 N 0.822
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.777
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.809
Ca_11133 Cicer arietinum Ca_11133 N 0.740
Ca_27441 Cicer arietinum Ca_27441 N 0.726
Cla006433 Citrullus lanatus Cla006433 N 0.716
Cla020893 Citrullus lanatus Cla020893 N 0.805
Pm012190 Prunus mume Pm012190 N 0.763
Pm016466 Prunus mume Pm016466 N 0.783
Pm029840 Prunus mume Pm029840 N 0.783
30024.m001746 Ricinus communis 30024.m001746 N 0.742
30131.m007244 Ricinus communis 30131.m007244 N 0.914
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.920
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.920