GRMZM2G157219 (Zea mays)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GRMZM2G157219 T249143_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.838 0.647
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.838 0.647
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G157219_P01 MADF 48 125
GRMZM2G157219_P02 MADF 48 125

Links

Other MADF family TFs
Other Zea mays TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.838
Cla002288 Citrullus lanatus Cla002288 I 0.835
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.843
mgf006505m Mimulus guttatus mgf006505m I 0.846
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.844
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.844
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.856
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.856
29900.m001628 Ricinus communis 29900.m001628 I 0.856
29814.m000741 Ricinus communis 29814.m000741 I 0.820
Cla019967 Citrullus lanatus Cla019967 I 0.844
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.837
Ca_19877 Cicer arietinum Ca_19877 I 0.853
Ca_00394 Cicer arietinum Ca_00394 I 0.814
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.842
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.836
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.821
TCM_029695 Theobroma cacao TCM_029695 I 0.814
Si022565m.g Setaria italica Si022565m.g I 0.969
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.967
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.848
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.876
PK27986.1 Cannabis sativa PK27986.1 I 0.814
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.838
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.819
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.813
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.969
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.969
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.826
MDP0000301451 Malus domestica MDP0000301451 I 0.840
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.829
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.848
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.813
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.846
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.841
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.871
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.826
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.829
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.829
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.838
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.814
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.814
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.907
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.913
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.917
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.880
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.917
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.845
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.814
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.838
OBART05G25610 Oryza barthii OBART05G25610 I 0.961
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.836
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.961
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.961
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.957
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.961
Bra003346 Brassica rapa Bra003346 I 0.839
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.961
Bo6g075950 Brassica oleracea Bo6g075950 I 0.842
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.961
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.961
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.961
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.961
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.878
OS05G0560600 Oryza sativa OS05G0560600 I 0.961
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.829
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.940
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.879
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.924
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.869
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.921
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.828
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.933
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.924
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.924
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.924
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.933
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.924
OS01G0674000 Oryza sativa OS01G0674000 N 0.924
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.931
TCM_042467 Theobroma cacao TCM_042467 N 0.836