Eucgr.K03133 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.K03133 T286993_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.755 0.843
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.718 0.779
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.687 0.736
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K03133.1 Myb 64 110
Eucgr.K03133.1 Myb 116 162
Eucgr.K03133.1 Myb 168 213
Eucgr.K03133.2 Myb 64 110
Eucgr.K03133.2 Myb 116 162
Eucgr.K03133.2 Myb 168 213

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.755
PK12011.1 Cannabis sativa PK12011.1 D 0.718
Q948S6_TOBAC Nicotiana tabacum Q948S6_TOBAC D 0.687
Pm002704 Prunus mume Pm002704 I 0.830
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.773
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.771
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.787
mgf019610m Mimulus guttatus mgf019610m I 0.821
mgf008601m Mimulus guttatus mgf008601m I 0.667
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.662
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.662
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.782
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.802
29846.m000184 Ricinus communis 29846.m000184 I 0.823
29794.m003447 Ricinus communis 29794.m003447 I 0.661
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.762
Cla018173 Citrullus lanatus Cla018173 I 0.760
Ca_21127 Cicer arietinum Ca_21127 I 0.674
Ca_14925 Cicer arietinum Ca_14925 I 0.667
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.835
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.735
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.804
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.804
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.804
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.727
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.741
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.821
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.810
PK11664.1 Cannabis sativa PK11664.1 I 0.740
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.801
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.770
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.837
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.787
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.798
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.841
MDP0000295807 Malus domestica MDP0000295807 I 0.678
MDP0000219581 Malus domestica MDP0000219581 I 0.799
MDP0000179225 Malus domestica MDP0000179225 I 0.671
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.773
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.821
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.821
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.818
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.763
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.663
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.883
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.841
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.762
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.773
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.782
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.755
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.684
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.818
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.747
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.721
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.823
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.775
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.807
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.823
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.696
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.696
GLYMA03G19470 Glycine max GLYMA03G19470 I 0.722
Solyc11g071300.1 Solanum lycopersicum Solyc11g071300.1 I 0.662
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.793
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.808
Bra034067 Brassica rapa Bra034067 I 0.834
Bra029762 Brassica rapa Bra029762 I 0.777
Bra009597 Brassica rapa Bra009597 I 0.727
Bo9g184660 Brassica oleracea Bo9g184660 I 0.711
Bo5g139340 Brassica oleracea Bo5g139340 I 0.778
Bo1g144510 Brassica oleracea Bo1g144510 I 0.834
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.688
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.728
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.771
TCM_021936 Theobroma cacao TCM_021936 I 0.850
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.765
Si021484m.g Setaria italica Si021484m.g I 0.671
Si000842m.g Setaria italica Si000842m.g I 0.787
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.781
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.830
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.665
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.835
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.765
OS05G0459000 Oryza sativa OS05G0459000 I 0.666
MYB3R-2 Oryza sativa OS01G0841500 I 0.760
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.688
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.666
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.760
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.702
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.688
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.693
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.760
OBART05G19200 Oryza barthii OBART05G19200 I 0.688
OB01G45570 Oryza brachyantha OB01G45570 I 0.739
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.771
F775_12121 Aegilops tauschii F775_12121 N 0.670
TRIUR3_33469 Triticum urartu TRIUR3_33469 N 0.670
Bra001311 Brassica rapa Bra001311 N 0.662
Bo3g062020 Brassica oleracea Bo3g062020 N 0.679
PDK_20s1314361g001 Phoenix dactylifera PDK_20s1314361g001 N 0.663