CRE29874 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE29874 T302313_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.900 0.671
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE29874 Nuclear receptor 49 118

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.900
Bm5457 Brugia malayi Bm5457 I 0.860
CBG03466 Caenorhabditis briggsae CBG03466 I 0.994
CBG03860 Caenorhabditis briggsae CBG03860 I 0.985
CBG04240 Caenorhabditis briggsae CBG04240 I 0.942
CBG13142 Caenorhabditis briggsae CBG13142 I 0.940
CBG14996 Caenorhabditis briggsae CBG14996 I 0.808
CBG14997 Caenorhabditis briggsae CBG14997 I 0.779
CBG22587 Caenorhabditis briggsae CBG22587 I 0.898
CBG22776 Caenorhabditis briggsae CBG22776 I 0.860
CBN00088 Caenorhabditis brenneri CBN00088 I 0.754
CBN04415 Caenorhabditis brenneri CBN04415 I 0.940
CBN05776 Caenorhabditis brenneri CBN05776 I 0.985
CBN08474 Caenorhabditis brenneri CBN08474 I 0.860
CBN21958 Caenorhabditis brenneri CBN21958 I 0.754
CBN28641 Caenorhabditis brenneri CBN28641 I 0.994
CBN32300 Caenorhabditis brenneri CBN32300 I 0.940
CJA02727 Caenorhabditis japonica CJA02727 I 0.943
CJA06107 Caenorhabditis japonica CJA06107 I 0.959
CJA14035 Caenorhabditis japonica CJA14035 I 0.860
CJA14248 Caenorhabditis japonica CJA14248 I 0.916
CJA14611 Caenorhabditis japonica CJA14611 I 0.994
CJA19445 Caenorhabditis japonica CJA19445 I 0.985
CJA39530 Caenorhabditis japonica CJA39530 I 0.757
CRE07033 Caenorhabditis remanei CRE07033 I 0.898
CRE07035 Caenorhabditis remanei CRE07035 I 0.789
CRE08264 Caenorhabditis remanei CRE08264 I 0.985
CRE09416 Caenorhabditis remanei CRE09416 I 0.824
CRE10779 Caenorhabditis remanei CRE10779 I 0.898
CRE21925 Caenorhabditis remanei CRE21925 I 0.860
CRE22212 Caenorhabditis remanei CRE22212 I 0.991
CRE24933 Caenorhabditis remanei CRE24933 I 0.937
CRE26423 Caenorhabditis remanei CRE26423 I 0.940
LOAG_07549 Loa loa LOAG_07549 I 0.860
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.863
PPA14696 Pristionchus pacificus PPA14696 I 0.980
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.982
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.994
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.860
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.960
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.959
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.985
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.754
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.815
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.860
Minc11307 Meloidogyne incognita Minc11307 I 0.804
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.994
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.994
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.808
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.890
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.890
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.890
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.860
ASU_00971 Ascaris suum ASU_00971 I 0.928
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.860
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.986
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.839
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.939
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.808
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.994
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.986
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.860
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.928
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.981
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.950
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.874
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.765
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.985
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.821
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.994
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.994
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.890
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.985
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.985
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.809
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.983
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.994
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.808
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.985
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.777
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.918
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.982
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.931
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.860
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.993
L889_g15424 Steinernema feltiae L889_g15424 I 0.926
L889_g16305 Steinernema feltiae L889_g16305 I 0.982
L889_g25097 Steinernema feltiae L889_g25097 I 0.860
L889_g2977 Steinernema feltiae L889_g2977 I 0.768
L889_g31970 Steinernema feltiae L889_g31970 I 0.918
L889_g366 Steinernema feltiae L889_g366 I 0.989
L892_g17146 Steinernema scapterisci L892_g17146 I 0.982
L892_g17832 Steinernema scapterisci L892_g17832 I 0.993
L892_g186 Steinernema scapterisci L892_g186 I 0.860
L892_g23093 Steinernema scapterisci L892_g23093 I 0.777
L892_g3438 Steinernema scapterisci L892_g3438 I 0.932
L893_g263 Steinernema glaseri L893_g263 I 0.918
L893_g33656 Steinernema glaseri L893_g33656 I 0.926
L893_g5404 Steinernema glaseri L893_g5404 I 0.989
L893_g6023 Steinernema glaseri L893_g6023 I 0.849
L893_g6565 Steinernema glaseri L893_g6565 I 0.982
L898_g11608 Steinernema monticolum L898_g11608 I 0.918
L898_g18440 Steinernema monticolum L898_g18440 I 0.860
L898_g32368 Steinernema monticolum L898_g32368 I 0.774
L898_g5338 Steinernema monticolum L898_g5338 I 0.982
L898_g9613 Steinernema monticolum L898_g9613 I 0.927
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.800
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.860
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.890
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.860
NECAME_02375 Necator americanus NECAME_02375 I 0.890
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.860
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.860
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.808
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.860
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.898
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.973
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.864
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.856
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.818
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.863
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.984
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.866
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.890
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.928
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.847
SMUV_0001036101 Syphacia muris SMUV_0001036101 I 0.890
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.931
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.864
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.864
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.931
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.931
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.864
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.890
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.860
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.860
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.889
ACAC_0000445401 Angiostrongylus cantonensis ACAC_0000445401 N 0.823
MhA1_Contig1031.frz3.gene17 Meloidogyne hapla MhA1_Contig1031.frz3.gene17 N 0.957
NECAME_11708 Necator americanus NECAME_11708 N 0.820
RSKR_0000426600 Rhabditophanes kr3021 RSKR_0000426600 N 0.865
TELCIR_16512 Teladorsagia circumcincta TELCIR_16512 N 0.823