Eucgr.A02825 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02825 T008103_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.692 0.860
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.692 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02825.1 AP2 24 75

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g050800 Brassica oleracea Bo8g050800 I 0.685
Bo9g104770 Brassica oleracea Bo9g104770 I 0.692
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.692
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.685
Bra010460 Brassica rapa Bra010460 I 0.685
Bra028290 Brassica rapa Bra028290 I 0.692
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.692
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.688
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.692
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.695
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.695
Ca_02407 Cicer arietinum Ca_02407 N 0.692
Ca_03665 Cicer arietinum Ca_03665 N 0.684
Ca_04504 Cicer arietinum Ca_04504 I 0.723
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.692
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.748
Cla002362 Citrullus lanatus Cla002362 I 0.679
Cla006315 Citrullus lanatus Cla006315 I 0.685
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.722
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.687
DREB1D Arabidopsis thaliana AT5G51990 D 0.692
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.683
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.798
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.795
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.802
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.798
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.798
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.810
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.757
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.806
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.798
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.810
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.682
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.754
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.748
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.695
Lus10019455.g Linum usitatissimum Lus10019455.g I 0.688
mgf016974m Mimulus guttatus mgf016974m I 0.791
mgf018631m Mimulus guttatus mgf018631m I 0.791
mgf018934m Mimulus guttatus mgf018934m I 0.791
mgf022408m Mimulus guttatus mgf022408m I 0.791
mgf026642m Mimulus guttatus mgf026642m I 0.689
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.742
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.748
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.687
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.718
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.715
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.711
PK23332.1 Cannabis sativa PK23332.1 I 0.682
Pm023777 Prunus mume Pm023777 N 0.699
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.695
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.703
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.699
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.687
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.682
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.680
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.677
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.678
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.692
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.685