GA12277 (Drosophila pseudoobscura)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0072323 T217550_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lms
M03863_2.00 		Drosophila melanogaster
BTAATTRV
BYAATTAV		 SELEX
Nitta et al.(2015)
CG13424_1 		0.867 1.000
lms
M03864_2.00 		Drosophila melanogaster
HTWATTRDWTDATTRR
YYAATHAWHYAATWAD		 SELEX
Nitta et al.(2015)
lms_1 		0.867 1.000
lms
M06536_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Mathelier et al.(2014)
MA0175.1 		0.867 1.000
lms
M06347_2.00 		Drosophila melanogaster
NYTAATKR
YMATTARN		 B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520 		0.867 1.000
lms
M06348_2.00 		Drosophila melanogaster
NNHTAATDRN
NYHATTADNN		 B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520 		0.867 1.000
lms
M06349_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520 		0.867 1.000
Emx2
M00495_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Emx2_3420 		0.741 0.596
ems
M02114_2.00 		Drosophila melanogaster
NTAATKRNB
VNYMATTAN		 PBM
Weirauch et al.(2014)
pTH5673 		0.741 0.596
EMX2
M03210_2.00 		Homo sapiens
NBTAATTANN
NNTAATTAVN		 SELEX
Jolma et al.(2013)
EMX2_1 		0.741 0.596
EMX2
M03211_2.00 		Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR		 SELEX
Jolma et al.(2013)
EMX2_2 		0.741 0.596
E5
M03814_2.00 		Drosophila melanogaster
STAATKNN
NNMATTAS		 SELEX
Nitta et al.(2015)
E5_1 		0.741 0.596
ems
M03789_2.00 		Drosophila melanogaster
BTAATTAN
NTAATTAV		 SELEX
Nitta et al.(2015)
ems_1 		0.741 0.596
ems
M03790_2.00 		Drosophila melanogaster
BTAATTAVBVBTAATKRN
NYMATTAVBVBTAATTAV		 SELEX
Nitta et al.(2015)
ems_2 		0.741 0.596
ems
M03791_2.00 		Drosophila melanogaster
BTAATKRN
NYMATTAV		 SELEX
Nitta et al.(2015)
ems_3 		0.741 0.596
ems
M03792_2.00 		Drosophila melanogaster
STAATKRSSSSTAATKRV
BYMATTASSSSYMATTAS		 SELEX
Nitta et al.(2015)
ems_4 		0.741 0.596
EMX2
M05281_2.00 		Homo sapiens
YTAATKAB
VTMATTAR		 SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX 		0.741 0.596
ems
M06484_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Mathelier et al.(2014)
MA0219.1 		0.741 0.596
E5
M06507_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Mathelier et al.(2014)
MA0189.1 		0.741 0.596
E5
M06293_2.00 		Drosophila melanogaster
NBTAATKA
TMATTAVN		 B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646 		0.741 0.596
E5
M06294_2.00 		Drosophila melanogaster
NTAATDR
YHATTAN		 B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646 		0.741 0.596
ems
M06233_2.00 		Drosophila melanogaster
WHTAATKR
YMATTADW		 B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576 		0.741 0.596
ems
M06234_2.00 		Drosophila melanogaster
TSTMATHM
KDATKASA		 B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576 		0.741 0.596
ems
M06235_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576 		0.741 0.596
ems
M09676_2.00 		Drosophila melanogaster
WTWATGA
TCATWAW		 Misc
Kulakovskiy et al.(2009)
ems 		0.741 0.596
EMX2
M05282_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX 		0.741 0.596
EMX1
M02088_2.00 		Homo sapiens
NNTAATKANN
NNTMATTANN		 PBM
Weirauch et al.(2014)
pTH5677 		0.741 0.579
EMX1
M03151_2.00 		Homo sapiens
NBTAATTRNN
NNYAATTAVN		 SELEX
Jolma et al.(2013)
EMX1_1 		0.741 0.579
EMX1
M03152_2.00 		Homo sapiens
YMATTARYTAATKR
YMATTARYTAATKR		 SELEX
Jolma et al.(2013)
EMX1_2 		0.741 0.579
EMX1
M05145_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX 		0.741 0.579
EMX1
M05147_2.00 		Homo sapiens
BTAATTAV
BTAATTAV		 SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX 		0.741 0.579
EMX1
M05146_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX 		0.741 0.579
EMX1
M05148_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX 		0.741 0.579
TLX3
M05233_2.00 		Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN
NAATTGNNNNNNNNNNNNNCMATTN		 SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX 		0.733 0.614
TLX3
M05235_2.00 		Homo sapiens
NAATTGNNNNNHNNNNCAATTN
NAATTGNNNNDNNNNNCAATTN		 SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX 		0.733 0.614
TLX3
M05234_2.00 		Homo sapiens
NAATTGNNNNNNNNNNDCAATTD
HAATTGHNNNNNNNNNNCAATTN		 SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX 		0.733 0.614
TLX3
M05236_2.00 		Homo sapiens
HAATTRNNNNNNNNNYHATTV
BAATDRNNNNNNNNNYAATTD		 SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX 		0.733 0.614
NK7.1
M03847_2.00 		Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB		 SELEX
Nitta et al.(2015)
NK7.1_1 		0.733 0.614
NK7.1
M03848_2.00 		Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN		 SELEX
Nitta et al.(2015)
NK7.1_2 		0.733 0.614
NK7.1
M06524_2.00 		Drosophila melanogaster
TTAATDR
YHATTAA		 B1H
Mathelier et al.(2014)
MA0196.1 		0.733 0.614
NK7.1
M06323_2.00 		Drosophila melanogaster
NTTAATDR
YHATTAAN		 B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321 		0.733 0.614
NK7.1
M06324_2.00 		Drosophila melanogaster
YTAATDR
YHATTAR		 B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321 		0.733 0.614
Nkx1-1
M00442_2.00 		Mus musculus
NNTAATNDNN
NNHNATTANN		 PBM
Berger et al.(2008)
Nkx1-1_3856 		0.731 0.614
Nkx1-2
M00503_2.00 		Mus musculus
NNTAAWNDN
NHNWTTANN		 PBM
Berger et al.(2008)
Nkx1-2_3214 		0.731 0.614
slou
M00557_2.00 		Drosophila melanogaster
NNTAATDRN
NYHATTANN		 PBM
Busser et al.(2012a)
Slou 		0.731 0.596
slou
M03798_2.00 		Drosophila melanogaster
VBTAATTRSB
VSYAATTAVB		 SELEX
Nitta et al.(2015)
slou_1 		0.731 0.596
slou
M06494_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Mathelier et al.(2014)
MA0245.1 		0.731 0.596
slou
M06262_2.00 		Drosophila melanogaster
BYTAATKR
YMATTARV		 B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941 		0.731 0.596
slou
M06263_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941 		0.731 0.596
VAX2
M00284_2.00 		Homo sapiens
NNTAATND
HNATTANN		 PBM
Barrera et al.(2016)
VAX2_REF 		0.726 0.579
Vax1
M00398_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Vax1_3499 		0.726 0.579
Vax2
M00464_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Vax2_3500 		0.726 0.579
VAX2
M03119_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX2_1 		0.726 0.579
VAX2
M05030_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX 		0.726 0.579
Vax1
M10764_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VAX1_04 		0.726 0.579
VAX2
M05031_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX 		0.726 0.579
CG11085
M03857_2.00 		Drosophila melanogaster
BTAAWYGN
NCRWTTAV		 SELEX
Nitta et al.(2015)
CG11085_1 		0.720 0.596
CG11085
M03858_2.00 		Drosophila melanogaster
NTAAWCGN
NCGWTTAN		 SELEX
Nitta et al.(2015)
CG11085_2 		0.720 0.596
CG11085
M06532_2.00 		Drosophila melanogaster
TTAATDG
CHATTAA		 B1H
Mathelier et al.(2014)
MA0171.1 		0.720 0.596
CG11085
M06339_2.00 		Drosophila melanogaster
NTTAATDGV
BCHATTAAN		 B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408 		0.720 0.596
CG11085
M06340_2.00 		Drosophila melanogaster
NHTAAWBRNN
NNYVWTTADN		 B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408 		0.720 0.596
VAX2
M00283_2.00 		Homo sapiens
NNTAAWNDNN
NNHNWTTANN		 PBM
Barrera et al.(2016)
VAX2_L139M 		0.719 0.561
Dfd
M03784_2.00 		Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB		 SELEX
Nitta et al.(2015)
Dfd_1 		0.717 0.544
Dfd
M03785_2.00 		Drosophila melanogaster
VYTAATKAYN
NRTMATTARB		 SELEX
Nitta et al.(2015)
Dfd_2 		0.717 0.544
Dfd
M06481_2.00 		Drosophila melanogaster
YTAATGA
TCATTAR		 B1H
Mathelier et al.(2014)
MA0186.1 		0.717 0.544
Dfd
M06226_2.00 		Drosophila melanogaster
VYTAATGA
TCATTAAB		 B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439 		0.717 0.544
Dfd
M06227_2.00 		Drosophila melanogaster
TTAATKRY
RYMATTAA		 B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439 		0.717 0.544
Dfd
M06228_2.00 		Drosophila melanogaster
NBTAATKR
YMATTAVN		 B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439 		0.717 0.544
Dfd
M09675_2.00 		Drosophila melanogaster
TTAATKRB
VYMATTAA		 Misc
Kulakovskiy et al.(2009)
Dfd 		0.717 0.544
Dfd
M10784_2.00 		Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN		 Transfac
Matys et al.(2006)
I$DFD_01 		0.717 0.544
ceh-5
M02179_2.00 		Caenorhabditis elegans
NNTAATDDN
NHHATTANN		 PBM
Weirauch et al.(2014)
pTH6562 		0.693 0.509
TLX2
M02087_2.00 		Homo sapiens
NYRDNNNNNN
NNNNNNHYRN		 PBM
Weirauch et al.(2014)
pTH6482 		0.688 0.596
Tlx2
M00526_2.00 		Mus musculus
WTTAAWTA
TAWTTAAW		 PBM
Berger et al.(2008)
Tlx2_3498 		0.688 0.596
TLX2
M05020_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX 		0.688 0.596
TLX2
M10672_2.00 		Homo sapiens
BNGTAAKDNB
VNHMTTACNV		 Transfac
Matys et al.(2006)
V$NCX_01 		0.688 0.596
TLX2
M05021_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX 		0.688 0.596
C15
M06505_2.00 		Drosophila melanogaster
TTAAWKR
YMWTTAA		 B1H
Mathelier et al.(2014)
MA0170.1 		0.684 0.544
C15
M06289_2.00 		Drosophila melanogaster
BTTAAWKR
YMWTTAAV		 B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863 		0.684 0.544
C15
M06290_2.00 		Drosophila melanogaster
NWTAAWKR
YMWTTAWN		 B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863 		0.684 0.544
Evx2
M00393_2.00 		Mus musculus
NNTAAYNN
NNRTTANN		 PBM
Berger et al.(2008)
Evx2_2645 		0.682 0.561
Evx1
M00395_2.00 		Mus musculus
NTAATBDNN
NNHVATTAN		 PBM
Berger et al.(2008)
Evx1_3952 		0.682 0.561
EVX1
M03102_2.00 		Homo sapiens
NNTAATBRBN
NVYVATTANN		 SELEX
Jolma et al.(2013)
EVX1_1 		0.682 0.561
EVX2
M03215_2.00 		Homo sapiens
NNTAATBRBN
NVYVATTANN		 SELEX
Jolma et al.(2013)
EVX2_1 		0.682 0.561
EVX1
M04985_2.00 		Homo sapiens
VTAATKAB
VTMATTAB		 SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX 		0.682 0.561
EVX2
M05295_2.00 		Homo sapiens
NTAATKAN
NTMATTAN		 SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX 		0.682 0.561
EVX2
M09158_2.00 		Homo sapiens
NBTTTATKRCHNN
NNDGYMATAAAVN		 Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A 		0.682 0.561
Evx1
M09174_2.00 		Mus musculus
WGATTTATDRBHN
NDVYHATAAATCW		 Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C 		0.682 0.561
Evx2
M09173_2.00 		Mus musculus
BTTTATKRCHBN
NVDGYMATAAAV		 Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A 		0.682 0.561
EVX2
M10736_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVX2_04 		0.682 0.561
EVX1
M04986_2.00 		Homo sapiens
NTMATKAN
NTMATKAN		 SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1 		0.682 0.561
EVX1
M04987_2.00 		Homo sapiens
HTWAYGAB
VTCRTWAD		 SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2 		0.682 0.561
EVX2
M05296_2.00 		Homo sapiens
NTAATKAN
NTMATTAN		 SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1 		0.682 0.561
EVX2
M05297_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2 		0.682 0.561
Pdx1
M00446_2.00 		Mus musculus
NWRAYNNN
NNNRTYWN		 PBM
Berger et al.(2008)
Ipf1_3815 		0.681 0.579
PDX1
M03155_2.00 		Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN		 SELEX
Jolma et al.(2013)
PDX1_1 		0.681 0.579
PDX1
M03156_2.00 		Homo sapiens
BTAATKRN
NYMATTAV		 SELEX
Jolma et al.(2013)
PDX1_2 		0.681 0.579
PDX1
M05161_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX 		0.681 0.579
PDX1
M09147_2.00 		Homo sapiens
TGATWGATK
MATCWATCA		 Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A 		0.681 0.579
Pdx1
M09192_2.00 		Mus musculus
VYTAATGRB
VYCATTARB		 Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B 		0.681 0.579
Pdx1
M09571_2.00 		Mus musculus
TGATTRATKR
YMATYAATCA		 Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281 		0.681 0.579
PDX1
M10699_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_01 		0.681 0.579
PDX1
M10700_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_02 		0.681 0.579
PDX1
M10701_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_03 		0.681 0.579
PDX1
M10702_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_04 		0.681 0.579
PDX1
M10703_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_05 		0.681 0.579
PDX1
M10704_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4_01 		0.681 0.579
PDX1
M10705_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4 		0.681 0.579
PDX1
M10706_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5_01 		0.681 0.579
PDX1
M10707_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5 		0.681 0.579
PDX1
M10708_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q6 		0.681 0.579
PDX1
M05162_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1 		0.681 0.579
PDX1
M05163_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2 		0.681 0.579
SPU_026099
M02175_2.00 		Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM		 PBM
Weirauch et al.(2014)
pTH6140 		0.681 0.561
ventx1.2.S
M10805_2.00 		Xenopus laevis
RSRMAAATWBBVS
SBBBWATTTKYSY		 Transfac
Matys et al.(2006)
V$XVENT1_01 		0.680 0.526
ENSTNIG00000006040
M02106_2.00 		Tetraodon nigroviridis
NNNBTAAWHRBNN
NNVYDWTTAVNNN		 PBM
Weirauch et al.(2014)
pTH6503 		0.678 0.614
vab-7
M02186_2.00 		Caenorhabditis elegans
KTAATTAK
MTAATTAM		 PBM
Weirauch et al.(2014)
pTH6104 		0.678 0.544
Q0N4M8_NEMVE
M02166_2.00 		Nematostella vectensis
HTAATKAC
GTMATTAD		 PBM
Weirauch et al.(2014)
pTH6215 		0.677 0.526
Barhl2
M00460_2.00 		Mus musculus
NTAAWNRNN
NNYNWTTAN		 PBM
Berger et al.(2008)
Barhl2_3868 		0.677 0.614
BARHL2
M03157_2.00 		Homo sapiens
NNTAAWYGNN
NNCRWTTANN		 SELEX
Jolma et al.(2013)
BARHL2_1 		0.677 0.614
BARHL2
M03158_2.00 		Homo sapiens
NNTAAWBGNN
NNCVWTTANN		 SELEX
Jolma et al.(2013)
BARHL2_2 		0.677 0.614
BARHL2
M03159_2.00 		Homo sapiens
TAAWYGNNNNTAAWYR
YRWTTANNNNCRWTTA		 SELEX
Jolma et al.(2013)
BARHL2_3 		0.677 0.614
BARHL2
M03160_2.00 		Homo sapiens
NNTAAWYGNH
DNCRWTTANN		 SELEX
Jolma et al.(2013)
BARHL2_4 		0.677 0.614
BARHL2
M03161_2.00 		Homo sapiens
NNTAAWYGNN
NNCRWTTANN		 SELEX
Jolma et al.(2013)
BARHL2_5 		0.677 0.614
BARHL2
M03162_2.00 		Homo sapiens
TAAWYGNYNHTAAWYG
CRWTTADNRNCRWTTA		 SELEX
Jolma et al.(2013)
BARHL2_6 		0.677 0.614
BARHL2
M05164_2.00 		Homo sapiens
HTAAAYGNY
RNCRTTTAD		 SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1 		0.677 0.614
BARHL2
M05165_2.00 		Homo sapiens
NTAAWTGNB
VNCAWTTAN		 SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2 		0.677 0.614
BARHL2
M05167_2.00 		Homo sapiens
NTAAWYGN
NCRWTTAN		 SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1 		0.677 0.614
BARHL2
M05168_2.00 		Homo sapiens
NTAAWYGN
NCRWTTAN		 SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2 		0.677 0.614
BARHL2
M05166_2.00 		Homo sapiens
NTAAWTGNB
VNCAWTTAN		 SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX 		0.677 0.614
BARHL2
M05169_2.00 		Homo sapiens
NTAAWTGN
NCAWTTAN		 SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX 		0.677 0.614
Barhl1
M00433_2.00 		Mus musculus
NTAAWNRNN
NNYNWTTAN		 PBM
Berger et al.(2008)
Barhl1_2590 		0.677 0.596
Barhl1
M03258_2.00 		Mus musculus
NNTAAWYGNH
DNCRWTTANN		 SELEX
Jolma et al.(2013)
Barhl1_1 		0.677 0.596
Barhl1
M03259_2.00 		Mus musculus
NNTAADNRNN
NNYNHTTANN		 SELEX
Jolma et al.(2013)
Barhl1_2 		0.677 0.596
Barhl1
M03260_2.00 		Mus musculus
TAAWYGNYNNTAAWYG
CRWTTANNRNCRWTTA		 SELEX
Jolma et al.(2013)
Barhl1_3 		0.677 0.596
BARHL1
M05091_2.00 		Homo sapiens
NTAAWYGN
NCRWTTAN		 SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1 		0.677 0.596
BARHL1
M05092_2.00 		Homo sapiens
NTAADBGN
NCVHTTAN		 SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2 		0.677 0.596
BARHL1
M05093_2.00 		Homo sapiens
NTAADKGN
NCMHTTAN		 SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX 		0.677 0.596
B-H1
M03829_2.00 		Drosophila melanogaster
VNTAAWYGNN
NNCRWTTANB		 SELEX
Nitta et al.(2015)
B-H1_1 		0.677 0.561
B-H1
M03830_2.00 		Drosophila melanogaster
SNTAADBGN
NCVHTTANS		 SELEX
Nitta et al.(2015)
B-H1_2 		0.677 0.561
B-H2
M03810_2.00 		Drosophila melanogaster
VNTAAAYGNH
DNCRTTTANB		 SELEX
Nitta et al.(2015)
B-H2_1 		0.677 0.561
B-H2
M03811_2.00 		Drosophila melanogaster
SNTAADBGN
NCVHTTANS		 SELEX
Nitta et al.(2015)
B-H2_2 		0.677 0.561
B-H2
M06503_2.00 		Drosophila melanogaster
WTAATTG
CAATTAW		 B1H
Mathelier et al.(2014)
MA0169.1 		0.677 0.561
B-H1
M06512_2.00 		Drosophila melanogaster
HTAAWYG
CRWTTAD		 B1H
Mathelier et al.(2014)
MA0168.1 		0.677 0.561
Q24780_9CNID
M02205_2.00 		Eleutheria dichotoma
NNYTAATTAMN
NKTAATTARNN		 PBM
Weirauch et al.(2014)
pTH6308 		0.677 0.526
Mnx1
M00388_2.00 		Mus musculus
NTAATBDNNN
NNNHVATTAN		 PBM
Berger et al.(2008)
Hlxb9_3422 		0.675 0.614
MNX1
M03143_2.00 		Homo sapiens
NHTAATTRNH
DNYAATTADN		 SELEX
Jolma et al.(2013)
MNX1_1 		0.675 0.614
MNX1
M05126_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX 		0.675 0.614
MNX1
M05127_2.00 		Homo sapiens
HTAAYGHB
VDCRTTAD		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1 		0.675 0.614
MNX1
M05128_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2 		0.675 0.614
exex
M03871_2.00 		Drosophila melanogaster
NNNNYAATTNNYDN
NHRNNAATTRNNNN		 SELEX
Nitta et al.(2015)
exex_1 		0.675 0.596
exex
M06544_2.00 		Drosophila melanogaster
BTAATTA
TAATTAV		 B1H
Mathelier et al.(2014)
MA0224.1 		0.675 0.596
exex
M06364_2.00 		Drosophila melanogaster
TAATTAV
BTAATTA		 B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156 		0.675 0.596
exex
M06365_2.00 		Drosophila melanogaster
TAATBR
YVATTA		 B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156 		0.675 0.596
HOXC4
M00330_2.00 		Homo sapiens
YTAATTRB
VYAATTAR		 PBM
Barrera et al.(2016)
HOXC4_REF 		0.672 0.526
Hoxa5
M00478_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxa5_3415 		0.672 0.526
Hoxb4
M00479_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxb4_2627 		0.672 0.526
Hoxb5
M00480_2.00 		Mus musculus
NWDWTNNNN
NNNNAWHWN		 PBM
Berger et al.(2008)
Hoxb5_3122 		0.672 0.526
Hoxc4
M00530_2.00 		Mus musculus
NWAATNDNN
NNHNATTWN		 PBM
Berger et al.(2008)
Hoxc4_3491 		0.672 0.526
HOXB5
M03125_2.00 		Homo sapiens
NNKAATKRNN
NNYMATTMNN		 SELEX
Jolma et al.(2013)
HOXB5_1 		0.672 0.526
HOXA5
M04968_2.00 		Homo sapiens
STAATKRS
SYMATTAS		 SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX 		0.672 0.526
HOXA5
M04971_2.00 		Homo sapiens
NTMATKRB
VYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX 		0.672 0.526
HOXB4
M05343_2.00 		Homo sapiens
YTAATKAY
RTMATTAR		 SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX 		0.672 0.526
HOXB5
M05051_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX 		0.672 0.526
HOXB5
M05054_2.00 		Homo sapiens
STMATKAB
VTMATKAS		 SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX 		0.672 0.526
HOXC4
M05385_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX 		0.672 0.526
HOXD4
M05273_2.00 		Homo sapiens
NTMATKRV
BYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX 		0.672 0.526
HOXD4
M05276_2.00 		Homo sapiens
NTAATKRB
VYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX 		0.672 0.526
HOXB4
M09162_2.00 		Homo sapiens
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B 		0.672 0.526
Hoxb4
M09204_2.00 		Mus musculus
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A 		0.672 0.526
Hoxb4
M09576_2.00 		Mus musculus
TGATDRATKRSN
NSYMATYHATCA		 Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014 		0.672 0.526
HOXA5
M10652_2.00 		Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN		 Transfac
Matys et al.(2006)
V$HOX13_01 		0.672 0.526
HOXA5
M08457_2.00 		Homo sapiens
CDBWAATK
MATTWVHG		 COMPILED
Mathelier et al.(2014)
MA0158.1 		0.672 0.526
HOXC4
M00328_2.00 		Homo sapiens
YTAATTAB
VTAATTAR		 PBM
Barrera et al.(2016)
HOXC4_N178S 		0.672 0.526
HOXA5
M04969_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1 		0.672 0.526
HOXA5
M04970_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2 		0.672 0.526
HOXA5
M04972_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1 		0.672 0.526
HOXA5
M04973_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2 		0.672 0.526
HOXB4
M05344_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1 		0.672 0.526
HOXB4
M05345_2.00 		Homo sapiens
HTAAYKAB
VTMRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2 		0.672 0.526
HOXB5
M05052_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1 		0.672 0.526
HOXB5
M05053_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2 		0.672 0.526
HOXB5
M05055_2.00 		Homo sapiens
NTMATKAB
VTMATKAN		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1 		0.672 0.526
HOXB5
M05056_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2 		0.672 0.526
HOXC4
M05386_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1 		0.672 0.526
HOXC4
M05387_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2 		0.672 0.526
HOXD4
M05274_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1 		0.672 0.526
HOXD4
M05275_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2 		0.672 0.526
HOXD4
M05277_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1 		0.672 0.526
HOXD4
M05278_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2 		0.672 0.526
Hoxa4
M00383_2.00 		Mus musculus
NTAATBDNN
NNHVATTAN		 PBM
Berger et al.(2008)
Hoxa4_3426 		0.672 0.509
HOXA4
M05381_2.00 		Homo sapiens
NTAATKRY
RYMATTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX 		0.672 0.509
HOXA4
M10755_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA4_Q2 		0.672 0.509
HOXA4
M05382_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX 		0.672 0.509
P79681_ACIBE
M02200_2.00 		Acipenser baerii
DTAATTRB
VYAATTAH		 PBM
Weirauch et al.(2014)
pTH6156 		0.671 0.526
HESX1
M00309_2.00 		Homo sapiens
HTAATTRGN
NCYAATTAD		 PBM
Barrera et al.(2016)
HESX1_REF 		0.671 0.509
HESX1
M00307_2.00 		Homo sapiens
TAATTRNN
NNYAATTA		 PBM
Barrera et al.(2016)
HESX1_N125S 		0.671 0.509
HESX1
M00308_2.00 		Homo sapiens
NATAHATRN
NYATDTATN		 PBM
Barrera et al.(2016)
HESX1_R160C 		0.671 0.491
Gbx2
M00462_2.00 		Mus musculus
NNDAHNN
NNDTHNN		 PBM
Berger et al.(2008)
Gbx2_3110 		0.667 0.561
Gbx1
M00525_2.00 		Mus musculus
NNTAATNR
YNATTANN		 PBM
Berger et al.(2008)
Gbx1_2883 		0.667 0.561
GBX1
M03193_2.00 		Homo sapiens
NBTAATTRSB
VSYAATTAVN		 SELEX
Jolma et al.(2013)
GBX1_1 		0.667 0.561
GBX2
M03201_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
GBX2_1 		0.667 0.561
GBX2
M03202_2.00 		Homo sapiens
TAATTRVBCAATWA
TWATTGVBYAATTA		 SELEX
Jolma et al.(2013)
GBX2_2 		0.667 0.561
GBX2
M03203_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
GBX2_3 		0.667 0.561
Gbx1
M03286_2.00 		Mus musculus
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
Gbx1_1 		0.667 0.561
Gbx2
M03268_2.00 		Mus musculus
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
Gbx2_1 		0.667 0.561
unpg
M03836_2.00 		Drosophila melanogaster
SSTAATYRVN
NBYRATTASS		 SELEX
Nitta et al.(2015)
unpg_1 		0.667 0.561
GBX2
M05265_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_eDBD_HT-SELEX 		0.667 0.561
GBX2
M05268_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
GBX2_FL_HT-SELEX 		0.667 0.561
unpg
M06517_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0251.1 		0.667 0.561
unpg
M06311_2.00 		Drosophila melanogaster
NBTAATTR
YAATTAVN		 B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561 		0.667 0.561
unpg
M06312_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561 		0.667 0.561
GBX2
M05266_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_1 		0.667 0.561
GBX2
M05267_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_2 		0.667 0.561
GBX2
M05269_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_1 		0.667 0.561
GBX2
M05270_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_2 		0.667 0.561
En2
M00484_2.00 		Mus musculus
NNYHATHN
NDATDRNN		 PBM
Berger et al.(2008)
En2_0952 		0.662 0.544
EN2
M03189_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
EN2_1 		0.662 0.544
EN2
M03190_2.00 		Homo sapiens
VBTAATTRNN
NNYAATTAVB		 SELEX
Jolma et al.(2013)
EN2_2 		0.662 0.544
En2
M03276_2.00 		Mus musculus
VBTAATTASN
NSTAATTAVB		 SELEX
Jolma et al.(2013)
En2_1 		0.662 0.544
EN2
M05237_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX 		0.662 0.544
EN2
M05238_2.00 		Homo sapiens
VHTDAYGHB
VDCRTHADB		 SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1 		0.662 0.544
EN2
M05239_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2 		0.662 0.544
En1
M00519_2.00 		Mus musculus
HNWTNNN
NNNAWND		 PBM
Berger et al.(2008)
En1_3123 		0.662 0.526
EN1
M03180_2.00 		Homo sapiens
NNTAATTRVB
VBYAATTANN		 SELEX
Jolma et al.(2013)
EN1_1 		0.662 0.526
EN1
M03181_2.00 		Homo sapiens
TAATTRSNYAATTA
TAATTRNSYAATTA		 SELEX
Jolma et al.(2013)
EN1_2 		0.662 0.526
EN1
M03182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
EN1_3 		0.662 0.526
EN1
M03183_2.00 		Homo sapiens
TDAKKRSNYMATTA
TAATKRNSYMMTHA		 SELEX
Jolma et al.(2013)
EN1_4 		0.662 0.526
EN1
M05218_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX 		0.662 0.526
EN1
M05871_2.00 		Homo sapiens
VNYAATTA
TAATTRNB		 SMiLE-seq
Isakova et al.(2017)
EN1 		0.662 0.526
EN1
M10714_2.00 		Homo sapiens
RTDDTBB
VVAHHAY		 Transfac
Matys et al.(2006)
V$EN1_01 		0.662 0.526
EN1
M05219_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1 		0.662 0.526
EN1
M05220_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2 		0.662 0.526
lin-39
M08211_2.00 		Caenorhabditis elegans
GATTGATG
CATCAATC		 ChIP-seq
Contrino et al.(2012)
Mw154 		0.661 0.526
lin-39
M09582_2.00 		Caenorhabditis elegans
DTGATWRATK
MATYWATCAH		 Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode 		0.661 0.526
zen2
M02118_2.00 		Drosophila melanogaster
NNTAATKRNN
NNYMATTANN		 PBM
Weirauch et al.(2014)
pTH5479 		0.659 0.544
zen2
M03806_2.00 		Drosophila melanogaster
BTAATKAS
STMATTAV		 SELEX
Nitta et al.(2015)
zen2_1 		0.659 0.544
zen2
M03807_2.00 		Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV		 SELEX
Nitta et al.(2015)
zen2_2 		0.659 0.544
zen2
M06501_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Mathelier et al.(2014)
MA0257.1 		0.659 0.544
zen2
M06279_2.00 		Drosophila melanogaster
HNBTAATKA
TMATTAVND		 B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054 		0.659 0.544
zen2
M06280_2.00 		Drosophila melanogaster
NNNTAATKRN
NYMATTANNN		 B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054 		0.659 0.544
zen2
M06281_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054 		0.659 0.544
Scr
M03799_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
Scr_1 		0.659 0.526
Scr
M06496_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0203.1 		0.659 0.526
Scr
M06266_2.00 		Drosophila melanogaster
HVYTAATKA
TMATTARBD		 B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339 		0.659 0.526
Scr
M06267_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339 		0.659 0.526
Hoxc5
M00422_2.00 		Mus musculus
NWRATND
HNATYWN		 PBM
Berger et al.(2008)
Hoxc5_2630 		0.659 0.509
MEOX2
M03103_2.00 		Homo sapiens
NNTRATKASN
NSTMATYANN		 SELEX
Jolma et al.(2013)
MEOX2_1 		0.657 0.526
MEOX2
M03104_2.00 		Homo sapiens
NTAATTANVNTAATTAV
BTAATTANBNTAATTAN		 SELEX
Jolma et al.(2013)
MEOX2_2 		0.657 0.526
MEOX2
M03105_2.00 		Homo sapiens
HTAATGATGATKAN
NTMATCATCATTAD		 SELEX
Jolma et al.(2013)
MEOX2_3 		0.657 0.526
Meox2
M03271_2.00 		Mus musculus
NTAATKAN
NTMATTAN		 SELEX
Jolma et al.(2013)
Meox2_1 		0.657 0.526
MEOX2
M04988_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1 		0.657 0.526
MEOX2
M04989_2.00 		Homo sapiens
NTVATBRV
BYVATBAN		 SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2 		0.657 0.526
Meox2
M10771_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEOX2_05 		0.657 0.526
MEOX2
M04990_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1 		0.657 0.526
MEOX2
M04991_2.00 		Homo sapiens
NTVATKRN
NYMATBAN		 SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2 		0.657 0.526
en
M03793_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
en_1 		0.657 0.526
en
M06485_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0220.1 		0.657 0.526
inv
M06491_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Mathelier et al.(2014)
MA0229.1 		0.657 0.526
en
M06236_2.00 		Drosophila melanogaster
NYTAATTR
YAATTARN		 B1H
Zhu et al.(2011)
En_Cell_FBgn0000577 		0.657 0.526
en
M06237_2.00 		Drosophila melanogaster
DBTAATKR
YMATTAVH		 B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577 		0.657 0.526
en
M06238_2.00 		Drosophila melanogaster
NNNTAATTRN
NYAATTANNN		 B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577 		0.657 0.526
en
M06239_2.00 		Drosophila melanogaster
NTAATTR
YAATTAN		 B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577 		0.657 0.526
inv
M06255_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269 		0.657 0.526
inv
M06256_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269 		0.657 0.526
inv
M06257_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269 		0.657 0.526
en
M09677_2.00 		Drosophila melanogaster
HTAATTRN
NYAATTAD		 Misc
Kulakovskiy et al.(2009)
en 		0.657 0.526
en
M10785_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$EN_Q6 		0.657 0.526
Hoxd3
M00531_2.00 		Mus musculus
NTAATNDN
NHNATTAN		 PBM
Berger et al.(2008)
Hoxd3_1742 		0.656 0.544
Hoxa3
M00172_2.00 		Mus musculus
NTAATKRNNN
NNNYMATTAN		 PBM
Badis et al.(2009)
Hoxa3_2783 		0.656 0.544
Hoxa3
M00532_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxa3_2783 		0.656 0.544
Hoxd3
M03287_2.00 		Mus musculus
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
Hoxd3_1 		0.656 0.544
HOXD3
M05101_2.00 		Homo sapiens
CTAATTAS
STAATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX 		0.656 0.544
HOXA3
M10651_2.00 		Homo sapiens
SVTWNDDKB
VMHHNWABS		 Transfac
Matys et al.(2006)
V$HOXA3_01 		0.656 0.544
HOXD3
M05102_2.00 		Homo sapiens
YTAAYGAY
RTCRTTAR		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1 		0.656 0.544
HOXD3
M05103_2.00 		Homo sapiens
CTAATKAC
GTMATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2 		0.656 0.544
Gsx2
M00469_2.00 		Mus musculus
NTAATDDNN
NNHHATTAN		 PBM
Berger et al.(2008)
Gsh2_3990 		0.656 0.526
Hoxb3
M00504_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxb3_1720 		0.656 0.526
GSX1
M03205_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
GSX1_1 		0.656 0.526
GSX2
M03227_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
GSX2_1 		0.656 0.526
HOXB3
M03126_2.00 		Homo sapiens
NBTAATKRNN
NNYMATTAVN		 SELEX
Jolma et al.(2013)
HOXB3_1 		0.656 0.526
GSX1
M05271_2.00 		Homo sapiens
NYMATNRN
NYNATKRN		 SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX 		0.656 0.526
GSX2
M05329_2.00 		Homo sapiens
HTAATKRS
SYMATTAD		 SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX 		0.656 0.526
ind
M06527_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0228.1 		0.656 0.526
ind
M06329_2.00 		Drosophila melanogaster
YVYTAATKA
TMATTARBR		 B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776 		0.656 0.526
GSX1
M05272_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX 		0.656 0.526
GSX2
M05330_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX 		0.656 0.526
zen
M03805_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
zen_1 		0.656 0.509
zen
M06500_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0256.1 		0.656 0.509
zen
M06276_2.00 		Drosophila melanogaster
NBYTAATKA
TMATTARBN		 B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053 		0.656 0.509
zen
M06277_2.00 		Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT		 B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053 		0.656 0.509
zen
M06278_2.00 		Drosophila melanogaster
NYTAATKA
TMATTARN		 B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053 		0.656 0.509
Hmx1
M00524_2.00 		Mus musculus
NHDAKYRNNN
NNNYRMTHDN		 PBM
Berger et al.(2008)
Hmx1_3423 		0.655 0.614
HMX1
M03243_2.00 		Homo sapiens
NNTTAAKTGNY
RNCAMTTAANN		 SELEX
Jolma et al.(2013)
HMX1_1 		0.655 0.614
HMX1
M05392_2.00 		Homo sapiens
BNYAAKTGN
NCAMTTRNV		 SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX 		0.655 0.614
HMX1
M05393_2.00 		Homo sapiens
VNYAAKTGB
VCAMTTRNB		 SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX 		0.655 0.614
Hmx
M03882_2.00 		Drosophila melanogaster
NYRAKYGN
NCRMTYRN		 SELEX
Nitta et al.(2015)
Hmx_1 		0.653 0.596
Hmx
M06554_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Mathelier et al.(2014)
MA0192.1 		0.653 0.596
Hmx
M06386_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448 		0.653 0.596
Hmx
M06387_2.00 		Drosophila melanogaster
TTAATTG
CAATTAA		 B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448 		0.653 0.596
HMX3
M03233_2.00 		Homo sapiens
NNNTAAKTGNN
NNCAMTTANNN		 SELEX
Jolma et al.(2013)
HMX3_1 		0.653 0.579
HMX3
M10754_2.00 		Homo sapiens
CAAGTGCGTG
CACGCACTTG		 Transfac
Matys et al.(2006)
V$HMX1_01 		0.653 0.579
CG18599
M06539_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Mathelier et al.(2014)
MA0177.1 		0.651 0.526
CG18599
M06354_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592 		0.651 0.526
CG18599
M06355_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592 		0.651 0.526
HESX1
M00306_2.00 		Homo sapiens
WRATDRNN
NNYHATYW		 PBM
Barrera et al.(2016)
HESX1_E149K 		0.650 0.491
ENSCING00000016045
M02078_2.00 		Ciona intestinalis
NNYTAATTRGN
NCYAATTARNN		 PBM
Weirauch et al.(2014)
pTH6551 		0.649 0.456
ventx1.1.L
M02234_2.00 		Xenopus laevis
NNNNVBNNNN
NNNNVBNNNN		 PBM
Weirauch et al.(2014)
pTH6162 		0.646 0.491
eve
M00556_2.00 		Drosophila melanogaster
NNTAATTARN
NYTAATTANN		 PBM
Busser et al.(2012a)
Eve 		0.645 0.526
eve
M02115_2.00 		Drosophila melanogaster
NTAATNDNN
NNHNATTAN		 PBM
Weirauch et al.(2014)
pTH6436 		0.645 0.526
eve
M03794_2.00 		Drosophila melanogaster
VYTAATKASN
NSTMATTARB		 SELEX
Nitta et al.(2015)
eve_1 		0.645 0.526
eve
M06486_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0221.1 		0.645 0.526
eve
M06240_2.00 		Drosophila melanogaster
DYTAATKA
TMATTARH		 B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606 		0.645 0.526
eve
M06241_2.00 		Drosophila melanogaster
HKBTAAYNDTKY
RMAHNRTTAVMD		 B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606 		0.645 0.526
eve
M06242_2.00 		Drosophila melanogaster
NYTAATKA
TMATTARN		 B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606 		0.645 0.526
eve
M09678_2.00 		Drosophila melanogaster
NKHTAATKD
HMATTADMN		 Misc
Kulakovskiy et al.(2009)
eve 		0.645 0.526
eve
M10786_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$EVE_Q6 		0.645 0.526
ro
M06495_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Mathelier et al.(2014)
MA0241.1 		0.642 0.596
ro
M06264_2.00 		Drosophila melanogaster
NYTAATTA
TAATTARN		 B1H
Zhu et al.(2011)
Ro_Cell_FBgn0003267 		0.642 0.596
ro
M06265_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Ro_SOLEXA_FBgn0003267 		0.642 0.596
Hmx3_CONSTRUCT
M00537_2.00 		PBM CONSTRUCTS
NHDADYRNN
NNYRHTHDN		 PBM
Berger et al.(2008)
Hmx3_3490 		0.640 0.561
HOXC4
M00329_2.00 		Homo sapiens
NTAATKRNN
NNYMATTAN		 PBM
Barrera et al.(2016)
HOXC4_R158L 		0.639 0.509
Hmx2
M00507_2.00 		Mus musculus
NHRANYGNNN
NNNCRNTYDN		 PBM
Berger et al.(2008)
Hmx2_3424 		0.637 0.579
HMX2
M03234_2.00 		Homo sapiens
NNTTAAKTGNN
NNCAMTTAANN		 SELEX
Jolma et al.(2013)
HMX2_1 		0.637 0.579
HMX2
M05373_2.00 		Homo sapiens
GNHRAKYGS
SCRMTYDNC		 SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX 		0.637 0.579
HMX2
M05375_2.00 		Homo sapiens
NTTAAKTGNN
NNCAMTTAAN		 SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX 		0.637 0.579
HMX2
M05374_2.00 		Homo sapiens
NNTAAKTGN
NCAMTTANN		 SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX 		0.637 0.579
HMX2
M05376_2.00 		Homo sapiens
NTTAAKTGNN
NNCAMTTAAN		 SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX 		0.637 0.579
HOXA2
M02083_2.00 		Homo sapiens
NNNDHHNNN
NNNDDHNNN		 PBM
Weirauch et al.(2014)
pTH5887 		0.633 0.509
Hoxa2
M00403_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxa2_3079 		0.633 0.509
HOXA2
M03097_2.00 		Homo sapiens
NBTAATKRNN
NNYMATTAVN		 SELEX
Jolma et al.(2013)
HOXA2_1 		0.633 0.509
HOXB2
M03213_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
HOXB2_1 		0.633 0.509
Hoxa2
M03251_2.00 		Mus musculus
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
Hoxa2_1 		0.633 0.509
pb
M03872_2.00 		Drosophila melanogaster
NTRAYKRY
RYMRTYAN		 SELEX
Nitta et al.(2015)
pb_1 		0.633 0.509
HOXA2
M04962_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX 		0.633 0.509
HOXA2
M04965_2.00 		Homo sapiens
NTAATKAB
VTMATTAN		 SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX 		0.633 0.509
HOXB2
M05292_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX 		0.633 0.509
pb
M06545_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0238.1 		0.633 0.509
pb
M06366_2.00 		Drosophila melanogaster
BYTAATKA
TMATTARV		 B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481 		0.633 0.509
pb
M06367_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481 		0.633 0.509
Hoxa2
M09566_2.00 		Mus musculus
DTGATKGATKDB
VHMATCMATCAH		 Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al. 		0.633 0.509
HOXA2
M04963_2.00 		Homo sapiens
NTAATTAN
NTAATTAN		 SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1 		0.633 0.509
HOXA2
M04964_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2 		0.633 0.509
HOXA2
M04966_2.00 		Homo sapiens
NTAATKAB
VTMATTAN		 SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1 		0.633 0.509
HOXA2
M04967_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2 		0.633 0.509
HOXB2
M05293_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1 		0.633 0.509
HOXB2
M05294_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2 		0.633 0.509
NEMVEDRAFT_v1g8907
M02154_2.00 		Nematostella vectensis
NTAATDRNNN
NNNYHATTAN		 PBM
Weirauch et al.(2014)
pTH6483 		0.632 0.526
VENTX
M02091_2.00 		Homo sapiens
TTAATTAB
VTAATTAA		 PBM
Weirauch et al.(2014)
pTH5490 		0.629 0.526
VENTX
M00305_2.00 		Homo sapiens
DTAATTRR
YYAATTAH		 PBM
Barrera et al.(2016)
VENTX_REF 		0.629 0.526
VENTX
M03169_2.00 		Homo sapiens
YTAATBGNT
ANCVATTAR		 SELEX
Jolma et al.(2013)
VENTX_1 		0.629 0.526
VENTX
M03170_2.00 		Homo sapiens
VSYTAATSGRWAAMCGATTAG
CTAATCGKTTWYCSATTARSB		 SELEX
Jolma et al.(2013)
VENTX_2 		0.629 0.526
VENTX
M05188_2.00 		Homo sapiens
CGHTAATBG
CVATTADCG		 SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_1 		0.629 0.526
VENTX
M05189_2.00 		Homo sapiens
VNTAATBRNN
NNYVATTANB		 SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_2 		0.629 0.526
VENTX
M00303_2.00 		Homo sapiens
NVTAATTANNN
NNNTAATTABN		 PBM
Barrera et al.(2016)
VENTX_E101K 		0.629 0.526
VENTX
M05190_2.00 		Homo sapiens
VHTAATKRNN
NNYMATTADB		 SELEX
Yin et al.(2017)
VENTX_FL_Methyl-HT-SELEX 		0.629 0.526
VENTX
M00304_2.00 		Homo sapiens
NATAYATAB
VTATRTATN		 PBM
Barrera et al.(2016)
VENTX_R143C 		0.629 0.509
NEMVEDRAFT_v1g205636
M02150_2.00 		Nematostella vectensis
NTAATTAN
NTAATTAN		 PBM
Weirauch et al.(2014)
pTH5491 		0.628 0.491
ESX1
M00292_2.00 		Homo sapiens
NNTAATNDN
NHNATTANN		 PBM
Barrera et al.(2016)
ESX1_REF 		0.625 0.491
ESX1
M03137_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ESX1_1 		0.625 0.491
ESX1
M03138_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ESX1_2 		0.625 0.491
ESX1
M05087_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ESX1_eDBD_HT-SELEX 		0.625 0.491
ESX1
M05089_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ESX1_FL_HT-SELEX 		0.625 0.491
ESX1
M05088_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ESX1_eDBD_Methyl-HT-SELEX 		0.625 0.491
ESX1
M05090_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ESX1_FL_Methyl-HT-SELEX 		0.625 0.491
ventx3.2
M02232_2.00 		Xenopus tropicalis
ATTAATTA
TAATTAAT		 PBM
Weirauch et al.(2014)
pTH6291 		0.614 0.474
Meox1
M00384_2.00 		Mus musculus
NTRATKRNN
NNYMATYAN		 PBM
Berger et al.(2008)
Meox1_2310 		0.612 0.491
MEOX1
M03077_2.00 		Homo sapiens
NNTAATTASN
NSTAATTANN		 SELEX
Jolma et al.(2013)
MEOX1_1 		0.612 0.491
MEOX1
M04901_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1 		0.612 0.491
MEOX1
M04902_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2 		0.612 0.491
MEOX1
M04903_2.00 		Homo sapiens
NTAAYGWB
VWCRTTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1 		0.612 0.491
MEOX1
M04904_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2 		0.612 0.491
ceh-62
M02187_2.00 		Caenorhabditis elegans
NNYAATTRNN
NNYAATTRNN		 PBM
Weirauch et al.(2014)
pTH5492 		0.612 0.491
SNAPOd2T00006620001
M02231_2.00 		Oikopleura dioica
NTAATTRN
NYAATTAN		 PBM
Weirauch et al.(2014)
pTH5666 		0.609 0.421
Noto
M02101_2.00 		Mus musculus
NNHHATDDNN
NNHHATDDNN		 PBM
Weirauch et al.(2014)
pTH6268 		0.608 0.456
Msx3
M00429_2.00 		Mus musculus
TAATKDNN
NNHMATTA		 PBM
Berger et al.(2008)
Msx3_3206 		0.608 0.561
Msx1
M00501_2.00 		Mus musculus
NHDATND
HNATHDN		 PBM
Berger et al.(2008)
Msx1_3031 		0.608 0.561
MSX1
M03184_2.00 		Homo sapiens
TAATTRBHHNHTAATTRN
NYAATTADNDDVYAATTA		 SELEX
Jolma et al.(2013)
MSX1_1 		0.608 0.561
MSX1
M03185_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
MSX1_2 		0.608 0.561
MSX1
M03186_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
MSX1_3 		0.608 0.561
Msx3
M03255_2.00 		Mus musculus
TAATTGSHHNNTAATTRN
NYAATTANNDDSCAATTA		 SELEX
Jolma et al.(2013)
Msx3_1 		0.608 0.561
Msx3
M03256_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Msx3_2 		0.608 0.561
MSX1
M05221_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
MSX1_eDBD_HT-SELEX 		0.608 0.561
MSX1
M05224_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX1_FL_HT-SELEX 		0.608 0.561
MSX1
M10715_2.00 		Homo sapiens
HNBTWWNTG
CANWWAVND		 Transfac
Matys et al.(2006)
V$MSX1_01 		0.608 0.561
MSX1
M10716_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX1_Q5_01 		0.608 0.561
MSX1
M10717_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX1_Q5 		0.608 0.561
MSX1
M05222_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_1 		0.608 0.561
MSX1
M05223_2.00 		Homo sapiens
NTWAYGMB
VKCRTWAN		 SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_2 		0.608 0.561
MSX1
M05225_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_1 		0.608 0.561
MSX1
M05226_2.00 		Homo sapiens
NTWAYGWB
VWCRTWAN		 SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_2 		0.608 0.561
MSX2
M00290_2.00 		Homo sapiens
WDATNDNN
NNHNATHW		 PBM
Barrera et al.(2016)
MSX2_REF 		0.608 0.544
Msx2
M00414_2.00 		Mus musculus
HRATKRNN
NNYMATYD		 PBM
Berger et al.(2008)
Msx2_3449 		0.608 0.544
MSX2
M03127_2.00 		Homo sapiens
TAATTRBHWKWTAATTGV
BCAATTAWMWDVYAATTA		 SELEX
Jolma et al.(2013)
MSX2_1 		0.608 0.544
MSX2
M03128_2.00 		Homo sapiens
NTAATTGB
VCAATTAN		 SELEX
Jolma et al.(2013)
MSX2_2 		0.608 0.544
MSX2
M05060_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX2_eDBD_HT-SELEX 		0.608 0.544
MSX2
M10677_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX2_Q3 		0.608 0.544
MSX2
M10678_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MSX2_Q6 		0.608 0.544
MSX2
M00288_2.00 		Homo sapiens
NTAATNDN
NHNATTAN		 PBM
Barrera et al.(2016)
MSX2_P148H 		0.608 0.544
MSX2
M05061_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_1 		0.608 0.544
MSX2
M05062_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_2 		0.608 0.544
Dr
M00555_2.00 		Drosophila melanogaster
TAATTRNN
NNYAATTA		 PBM
Busser et al.(2012a)
Msh 		0.608 0.526
Dr
M06482_2.00 		Drosophila melanogaster
TAATTGS
SCAATTA		 B1H
Mathelier et al.(2014)
MA0188.1 		0.608 0.526
Dr
M06229_2.00 		Drosophila melanogaster
TAATTGSHB
VDSCAATTA		 B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492 		0.608 0.526
Dr
M06230_2.00 		Drosophila melanogaster
TAATTR
YAATTA		 B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492 		0.608 0.526
Rax
M00426_2.00 		Mus musculus
NNTAATTRN
NYAATTANN		 PBM
Berger et al.(2008)
Rax_3443 		0.607 0.439
RAX
M03149_2.00 		Homo sapiens
NHTAATTRNN
NNYAATTADN		 SELEX
Jolma et al.(2013)
RAX_1 		0.607 0.439
RAX2
M03214_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
RAXL1_1 		0.607 0.439
Rx
M03840_2.00 		Drosophila melanogaster
BTAATTRV
BYAATTAV		 SELEX
Nitta et al.(2015)
Rx_1 		0.607 0.439
Rx
M03841_2.00 		Drosophila melanogaster
NTAATBNSATTAN
NTAATSNVATTAN		 SELEX
Nitta et al.(2015)
Rx_2 		0.607 0.439
RAX
M05142_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_HT-SELEX 		0.607 0.439
Rx
M06520_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0202.1 		0.607 0.439
Rx
M06317_2.00 		Drosophila melanogaster
VYTAATTR
YAATTARB		 B1H
Zhu et al.(2011)
Rx_Cell_FBgn0020617 		0.607 0.439
Rx
M06318_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Rx_SOLEXA_FBgn0020617 		0.607 0.439
Rax
M10773_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RAX_04 		0.607 0.439
RAX
M05143_2.00 		Homo sapiens
NTAAYRNN
NNYRTTAN		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_1 		0.607 0.439
RAX
M05144_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_2 		0.607 0.439
Otp
M00417_2.00 		Mus musculus
NNHAATND
HNATTDNN		 PBM
Berger et al.(2008)
Otp_3496 		0.606 0.456
LBX1
M02090_2.00 		Homo sapiens
NTAAYTRG
CYARTTAN		 PBM
Weirauch et al.(2014)
pTH6404 		0.604 0.526
otp
M03834_2.00 		Drosophila melanogaster
BTAATTRN
NYAATTAV		 SELEX
Nitta et al.(2015)
otp_1 		0.601 0.439
otp
M03835_2.00 		Drosophila melanogaster
YTAATTRV
BYAATTAR		 SELEX
Nitta et al.(2015)
otp_2 		0.601 0.439
otp
M06516_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Mathelier et al.(2014)
MA0236.1 		0.601 0.439
otp
M06309_2.00 		Drosophila melanogaster
HYTAATTA
TAATTARD		 B1H
Zhu et al.(2011)
Otp_Cell_FBgn0015524 		0.601 0.439
otp
M06310_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Otp_SOLEXA_FBgn0015524 		0.601 0.439
Q9BJW6_9CNID
M02215_2.00 		Sarsia sp. Long Island Sound
NBTAATTAVN
NBTAATTAVN		 PBM
Weirauch et al.(2014)
pTH6287 		0.600 0.491
MSX2
M00289_2.00 		Homo sapiens
WDATWDNN
NNHWATHW		 PBM
Barrera et al.(2016)
MSX2_R172H 		0.600 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0277601 Homeodomain 92 148

Links

Other Homeodomain family TFs
Other Drosophila pseudoobscura TFs

5259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28271.m000023 Ricinus communis 28271.m000023 I
29788.m000340 Ricinus communis 29788.m000340 I
29823.m000215 Ricinus communis 29823.m000215 I
30076.m004607 Ricinus communis 30076.m004607 I
AMTR_s00003p00219710 Amborella trichopoda AMTR_s00003p00219710 I
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I
AMTR_s00039p00172240 Amborella trichopoda AMTR_s00039p00172240 I
AMTR_s00079p00140660 Amborella trichopoda AMTR_s00079p00140660 I
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I
Aquca_003_00309 Aquilegia coerulea Aquca_003_00309 I
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I
Aquca_041_00011 Aquilegia coerulea Aquca_041_00011 I
Aquca_073_00028 Aquilegia coerulea Aquca_073_00028 I
ATMYB121 Arabidopsis thaliana AT3G30210 D
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I
ATMYB121 Vitis vinifera VIT_14s0083g01060 I
ATMYB2 Vitis vinifera VIT_07s0005g01950 I
AtMYB27 Vitis vinifera VIT_08s0007g04830 I
ATMYB48 Arabidopsis thaliana AT3G46130 I
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I
BGIOSGA002469 Oryza indica BGIOSGA002469 I
BGIOSGA005283 Oryza indica BGIOSGA005283 I
BGIOSGA006030 Oryza indica BGIOSGA006030 I
BGIOSGA010857 Oryza indica BGIOSGA010857 I
BGIOSGA011479 Oryza indica BGIOSGA011479 I
BGIOSGA014750 Oryza indica BGIOSGA014750 I
BGIOSGA018863 Oryza indica BGIOSGA018863 I
BGIOSGA026430 Oryza indica BGIOSGA026430 I
BGIOSGA035986 Oryza indica BGIOSGA035986 I
Bo1g098860 Brassica oleracea Bo1g098860 I
Bo1g147890 Brassica oleracea Bo1g147890 I
Bo2g025410 Brassica oleracea Bo2g025410 I
Bo2g057760 Brassica oleracea Bo2g057760 I
Bo3g060620 Brassica oleracea Bo3g060620 I
Bo3g083130 Brassica oleracea Bo3g083130 I
Bo5g043390 Brassica oleracea Bo5g043390 I
Bo5g143460 Brassica oleracea Bo5g143460 I
Bo6g097180 Brassica oleracea Bo6g097180 I
Bo6g106730 Brassica oleracea Bo6g106730 I
Bo7g033260 Brassica oleracea Bo7g033260 I
Bo7g050560 Brassica oleracea Bo7g050560 I
Bo7g088650 Brassica oleracea Bo7g088650 I
Bo9g009020 Brassica oleracea Bo9g009020 I
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I
Bostr.12659s0423 Boechera stricta Bostr.12659s0423 I
Bostr.15654s0036 Boechera stricta Bostr.15654s0036 I
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I
Bostr.2570s0008 Boechera stricta Bostr.2570s0008 I
Bostr.26959s0063 Boechera stricta Bostr.26959s0063 I
Bostr.7200s0008 Boechera stricta Bostr.7200s0008 I
Bra001202 Brassica rapa Bra001202 I
Bra001941 Brassica rapa Bra001941 I
Bra004041 Brassica rapa Bra004041 I
Bra004297 Brassica rapa Bra004297 I
Bra006694 Brassica rapa Bra006694 I
Bra012482 Brassica rapa Bra012482 I
Bra015029 Brassica rapa Bra015029 I
Bra020289 Brassica rapa Bra020289 I
Bra020744 Brassica rapa Bra020744 I
Bra025410 Brassica rapa Bra025410 I
Bra028369 Brassica rapa Bra028369 I
Bra029582 Brassica rapa Bra029582 I
Bra033948 Brassica rapa Bra033948 I
Bra036202 Brassica rapa Bra036202 I
Bra040274 Brassica rapa Bra040274 I
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I
BRADI2G01960 Brachypodium distachyon BRADI2G01960 I
BRADI2G11430 Brachypodium distachyon BRADI2G11430 I
BRADI2G38560 Brachypodium distachyon BRADI2G38560 I
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I
Cagra.0352s0034 Capsella grandiflora Cagra.0352s0034 I
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I
Cagra.2231s0026 Capsella grandiflora Cagra.2231s0026 I
Cagra.9553s0006 Capsella grandiflora Cagra.9553s0006 I
Carubv10007254m.g Capsella rubella Carubv10007254m.g I
Carubv10007255m.g Capsella rubella Carubv10007255m.g I
Carubv10010143m.g Capsella rubella Carubv10010143m.g I
Carubv10010865m.g Capsella rubella Carubv10010865m.g I
Carubv10014195m.g Capsella rubella Carubv10014195m.g I
Carubv10014367m.g Capsella rubella Carubv10014367m.g I
Carubv10017875m.g Capsella rubella Carubv10017875m.g I
Carubv10018530m.g Capsella rubella Carubv10018530m.g I
Carubv10021411m.g Capsella rubella Carubv10021411m.g I
Carubv10025227m.g Capsella rubella Carubv10025227m.g I
cassava11031.m1 Manihot esculenta cassava11031.m1 I
cassava12704.valid.m1 Manihot esculenta cassava12704.valid.m1 I
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I
cassava25455.m1 Manihot esculenta cassava25455.m1 I
cassava28986.valid.m1 Manihot esculenta cassava28986.valid.m1 I
cassava39393.m1 Manihot esculenta cassava39393.m1 I
cassava45669.m1 Manihot esculenta cassava45669.m1 I
cassava46139.m1 Manihot esculenta cassava46139.m1 I
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I
cassava9274.m1 Manihot esculenta cassava9274.m1 I
cassava9891.m1 Manihot esculenta cassava9891.m1 I
Ca_03053 Cicer arietinum Ca_03053 I
Ca_03535 Cicer arietinum Ca_03535 I
Ca_05503 Cicer arietinum Ca_05503 I
Ca_07872 Cicer arietinum Ca_07872 I
Ca_20437 Cicer arietinum Ca_20437 I
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I
Ciclev10014958m.g Citrus clementina Ciclev10014958m.g I
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I
Ciclev10016820m.g Citrus clementina Ciclev10016820m.g I
Ciclev10021157m.g Citrus clementina Ciclev10021157m.g I
Ciclev10021479m.g Citrus clementina Ciclev10021479m.g I
Cla007745 Citrullus lanatus Cla007745 I
Cla008412 Citrullus lanatus Cla008412 I
Cla010584 Citrullus lanatus Cla010584 I
Cla015409 Citrullus lanatus Cla015409 I
Cla016762 Citrullus lanatus Cla016762 I
Cla017610 Citrullus lanatus Cla017610 I
Cla018782 Citrullus lanatus Cla018782 I
Cla019255 Citrullus lanatus Cla019255 I
Cla021798 Citrullus lanatus Cla021798 I
Cucsa.011440 Cucumis sativus Cucsa.011440 I
Cucsa.111120 Cucumis sativus Cucsa.111120 I
Cucsa.121500 Cucumis sativus Cucsa.121500 I
Cucsa.128620 Cucumis sativus Cucsa.128620 I
Cucsa.213510 Cucumis sativus Cucsa.213510 I
Cucsa.238540 Cucumis sativus Cucsa.238540 I
Cucsa.255900 Cucumis sativus Cucsa.255900 I
Cucsa.300720 Cucumis sativus Cucsa.300720 I
Cucsa.365190 Cucumis sativus Cucsa.365190 I
Cucsa.383230 Cucumis sativus Cucsa.383230 I
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I
Eucgr.B03006 Eucalyptus grandis Eucgr.B03006 I
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I
Eucgr.H00907 Eucalyptus grandis Eucgr.H00907 I
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I
Eucgr.K03562 Eucalyptus grandis Eucgr.K03562 I
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I
evm.TU.supercontig_14.220 Carica papaya evm.TU.supercontig_14.220 I
evm.TU.supercontig_145.21 Carica papaya evm.TU.supercontig_145.21 I
evm.TU.supercontig_186.7 Carica papaya evm.TU.supercontig_186.7 I
evm.TU.supercontig_3.501 Carica papaya evm.TU.supercontig_3.501 I
evm.TU.supercontig_3.502 Carica papaya evm.TU.supercontig_3.502 I
evm.TU.supercontig_49.71 Carica papaya evm.TU.supercontig_49.71 I
evm.TU.supercontig_51.138 Carica papaya evm.TU.supercontig_51.138 I
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I
evm.TU.supercontig_798.1 Carica papaya evm.TU.supercontig_798.1 I
F775_02803 Aegilops tauschii F775_02803 I
F775_06315 Aegilops tauschii F775_06315 I
F775_06959 Aegilops tauschii F775_06959 I
F775_14949 Aegilops tauschii F775_14949 I
F775_23572 Aegilops tauschii F775_23572 I
F775_25534 Aegilops tauschii F775_25534 I
F775_32337 Aegilops tauschii F775_32337 N
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I
gene03712-v1.0-hybrid Fragaria vesca gene03712-v1.0-hybrid I
gene25149-v1.0-hybrid Fragaria vesca gene25149-v1.0-hybrid I
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I
gene28435-v1.0-hybrid Fragaria vesca gene28435-v1.0-hybrid I
GLYMA03G38040 Glycine max GLYMA03G38040 I
GLYMA04G26650 Glycine max GLYMA04G26650 I
GLYMA05G35050 Glycine max GLYMA05G35050 I
GLYMA06G38340 Glycine max GLYMA06G38340 I
GLYMA07G10321 Glycine max GLYMA07G10321 I
GLYMA07G36430 Glycine max GLYMA07G36430 I
GLYMA08G04670 Glycine max GLYMA08G04670 I
GLYMA08G27660 Glycine max GLYMA08G27660 I
GLYMA09G31570 Glycine max GLYMA09G31570 I
GLYMA10G26681 Glycine max GLYMA10G26681 I
GLYMA10G33450 Glycine max GLYMA10G33450 I
GLYMA10G41930 Glycine max GLYMA10G41930 I
GLYMA13G16890 Glycine max GLYMA13G16890 I
GLYMA15G14190 Glycine max GLYMA15G14190 I
GLYMA16G07960 Glycine max GLYMA16G07960 I
GLYMA17G05831 Glycine max GLYMA17G05831 I
GLYMA17G17560 Glycine max GLYMA17G17560 I
GLYMA18G50881 Glycine max GLYMA18G50881 I
GLYMA18G50891 Glycine max GLYMA18G50891 I
GLYMA19G14230 Glycine max GLYMA19G14230 I
GLYMA19G14270 Glycine max GLYMA19G14270 I
GLYMA20G20980 Glycine max GLYMA20G20980 I
GLYMA20G25110 Glycine max GLYMA20G25110 I
GLYMA20G34140 Glycine max GLYMA20G34140 I
Gorai.001G075000 Gossypium raimondii Gorai.001G075000 I
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I
Gorai.001G263200 Gossypium raimondii Gorai.001G263200 I
Gorai.002G089900 Gossypium raimondii Gorai.002G089900 I
Gorai.002G218600 Gossypium raimondii Gorai.002G218600 I
Gorai.004G145800 Gossypium raimondii Gorai.004G145800 I
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I
Gorai.006G030800 Gossypium raimondii Gorai.006G030800 I
Gorai.006G060300 Gossypium raimondii Gorai.006G060300 I
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I
Gorai.007G312400 Gossypium raimondii Gorai.007G312400 I
Gorai.007G312700 Gossypium raimondii Gorai.007G312700 I
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I
Gorai.008G287100 Gossypium raimondii Gorai.008G287100 I
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I
GRMZM2G001824 Zea mays GRMZM2G001824 I
GRMZM2G027697 Zea mays GRMZM2G027697 I
GRMZM2G043792 Zea mays GRMZM2G043792 I
GRMZM2G047626 Zea mays GRMZM2G047626 I
GRMZM2G054111 Zea mays GRMZM2G054111 I
GRMZM2G070849 Zea mays GRMZM2G070849 I
GRMZM2G089686 Zea mays GRMZM2G089686 I
GRMZM2G096358 Zea mays GRMZM2G096358 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
GRMZM2G134279 Zea mays GRMZM2G134279 I
GRMZM2G158700 Zea mays GRMZM2G158700 I
GRMZM2G162709 Zea mays GRMZM2G162709 I
GRMZM2G330475 Zea mays GRMZM2G330475 I
GRMZM2G425427 Zea mays GRMZM2G425427 I
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I
GSMUA_Achr10G19840_001 Musa acuminata GSMUA_Achr10G19840_001 I
GSMUA_Achr11G02410_001 Musa acuminata GSMUA_Achr11G02410_001 I
GSMUA_Achr11G13200_001 Musa acuminata GSMUA_Achr11G13200_001 I
GSMUA_Achr11G16130_001 Musa acuminata GSMUA_Achr11G16130_001 I
GSMUA_Achr11G17190_001 Musa acuminata GSMUA_Achr11G17190_001 I
GSMUA_Achr11G20830_001 Musa acuminata GSMUA_Achr11G20830_001 I
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I
GSMUA_Achr1G21020_001 Musa acuminata GSMUA_Achr1G21020_001 I
GSMUA_Achr1G24960_001 Musa acuminata GSMUA_Achr1G24960_001 I
GSMUA_Achr2G19380_001 Musa acuminata GSMUA_Achr2G19380_001 I
GSMUA_Achr2G22640_001 Musa acuminata GSMUA_Achr2G22640_001 I
GSMUA_Achr3G01370_001 Musa acuminata GSMUA_Achr3G01370_001 I
GSMUA_Achr3G08370_001 Musa acuminata GSMUA_Achr3G08370_001 I
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I
GSMUA_Achr3G21060_001 Musa acuminata GSMUA_Achr3G21060_001 I
GSMUA_Achr4G29230_001 Musa acuminata GSMUA_Achr4G29230_001 I
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I
GSMUA_Achr7G05570_001 Musa acuminata GSMUA_Achr7G05570_001 I
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I
GSMUA_Achr8G10800_001 Musa acuminata GSMUA_Achr8G10800_001 I
GSMUA_Achr8G12710_001 Musa acuminata GSMUA_Achr8G12710_001 I
GSMUA_Achr8G18460_001 Musa acuminata GSMUA_Achr8G18460_001 I
GSMUA_Achr9G16640_001 Musa acuminata GSMUA_Achr9G16640_001 I
GSMUA_AchrUn_randomG27010_001 Musa acuminata GSMUA_AchrUn_randomG27010_001 I
LjT44F11.120.nd Lotus japonicus LjT44F11.120.nd I
LPERR01G01750 Leersia perrieri LPERR01G01750 I
LPERR01G40120 Leersia perrieri LPERR01G40120 I
LPERR03G13320 Leersia perrieri LPERR03G13320 I
LPERR04G14700 Leersia perrieri LPERR04G14700 I
LPERR07G23760 Leersia perrieri LPERR07G23760 I
LPERR12G13390 Leersia perrieri LPERR12G13390 I
Lus10005079.g Linum usitatissimum Lus10005079.g I
Lus10005886.g Linum usitatissimum Lus10005886.g I
Lus10009037.g Linum usitatissimum Lus10009037.g I
Lus10014453.g Linum usitatissimum Lus10014453.g I
Lus10022259.g Linum usitatissimum Lus10022259.g I
Lus10023711.g Linum usitatissimum Lus10023711.g I
Lus10034338.g Linum usitatissimum Lus10034338.g I
Lus10034372.g Linum usitatissimum Lus10034372.g I
Lus10041435.g Linum usitatissimum Lus10041435.g I
MDP0000133412 Malus domestica MDP0000133412 I
MDP0000183451 Malus domestica MDP0000183451 I
MDP0000259898 Malus domestica MDP0000259898 I
MDP0000286143 Malus domestica MDP0000286143 I
MDP0000344978 Malus domestica MDP0000344978 I
MDP0000655330 Malus domestica MDP0000655330 I
MDP0000723614 Malus domestica MDP0000723614 I
MDP0000791870 Malus domestica MDP0000791870 I
MDP0000823458 Malus domestica MDP0000823458 I
MDP0000934638 Malus domestica MDP0000934638 I
mgf002201m Mimulus guttatus mgf002201m I
mgf004640m Mimulus guttatus mgf004640m I
MLOC_17928 Hordeum vulgare MLOC_17928 I
MLOC_52439 Hordeum vulgare MLOC_52439 I
MLOC_65555 Hordeum vulgare MLOC_65555 I
MLOC_66662 Hordeum vulgare MLOC_66662 I
MLOC_6786 Hordeum vulgare MLOC_6786 I
MLOC_9927 Hordeum vulgare MLOC_9927 I
MTR_1g045610 Medicago truncatula MTR_1g045610 I
MTR_1g073170 Medicago truncatula MTR_1g073170 I
MTR_1g110460 Medicago truncatula MTR_1g110460 I
MTR_3g083540 Medicago truncatula MTR_3g083540 I
MTR_6g006030 Medicago truncatula MTR_6g006030 I
MTR_7g035075 Medicago truncatula MTR_7g035075 I
MYB108 Arabidopsis thaliana AT3G06490 D
MYB108 Arabidopsis lyrata fgenesh2_kg.3__656__AT3G06490.1 I
MYB112 Arabidopsis thaliana AT1G48000 I
MYB112 Arabidopsis lyrata fgenesh2_kg.1__3889__AT1G48000.1 I
MYB116 Arabidopsis thaliana AT1G25340 D
MYB2 Oryza sativa OS03G0315400 I
MYB24 Arabidopsis thaliana AT5G40350 D
MYB305 Arabidopsis thaliana AT3G24310 I
MYB59 Arabidopsis thaliana AT5G59780 D
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I
MYB62 Arabidopsis thaliana AT1G68320 D
MYB62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001171 I
MYBAS2 Oryza sativa OS12G0567300 I
OB01G11750 Oryza brachyantha OB01G11750 I
OB01G22230 Oryza brachyantha OB01G22230 I
OB01G54920 Oryza brachyantha OB01G54920 I
OB02G31640 Oryza brachyantha OB02G31640 I
OB03G13340 Oryza brachyantha OB03G13340 I
OB03G25040 Oryza brachyantha OB03G25040 I
OB04G25360 Oryza brachyantha OB04G25360 I
OB05G12230 Oryza brachyantha OB05G12230 I
OB07G32480 Oryza brachyantha OB07G32480 I
OB12G23080 Oryza brachyantha OB12G23080 I
OBART01G01830 Oryza barthii OBART01G01830 I
OBART01G12500 Oryza barthii OBART01G12500 I
OBART01G45730 Oryza barthii OBART01G45730 I
OBART02G24300 Oryza barthii OBART02G24300 I
OBART07G26990 Oryza barthii OBART07G26990 I
OGLUM01G02010 Oryza glumaepatula OGLUM01G02010 I
OGLUM01G13990 Oryza glumaepatula OGLUM01G13990 I
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I
OGLUM05G02350 Oryza glumaepatula OGLUM05G02350 I
OGLUM07G26960 Oryza glumaepatula OGLUM07G26960 I
OLONG_008024 Oryza longistaminata OLONG_008024 I
OMERI01G01310 Oryza meridionalis OMERI01G01310 I
OMERI02G23750 Oryza meridionalis OMERI02G23750 I
OMERI07G23590 Oryza meridionalis OMERI07G23590 I
ONIVA01G01990 Oryza nivara ONIVA01G01990 I
ONIVA01G14890 Oryza nivara ONIVA01G14890 I
ONIVA05G02220 Oryza nivara ONIVA05G02220 I
ONIVA07G26740 Oryza nivara ONIVA07G26740 I
ONIVA09G12460 Oryza nivara ONIVA09G12460 I
OPUNC01G12250 Oryza punctata OPUNC01G12250 I
OPUNC01G44650 Oryza punctata OPUNC01G44650 I
OPUNC02G22200 Oryza punctata OPUNC02G22200 I
OPUNC05G02190 Oryza punctata OPUNC05G02190 I
OPUNC07G25360 Oryza punctata OPUNC07G25360 I
orange1.1g020603m.g Citrus sinensis orange1.1g020603m.g I
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I
orange1.1g039708m.g Citrus sinensis orange1.1g039708m.g I
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I
orange1.1g043269m.g Citrus sinensis orange1.1g043269m.g I
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I
orange1.1g045384m.g Citrus sinensis orange1.1g045384m.g I
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I
ORGLA01G0016500 Oryza glaberrima ORGLA01G0016500 I
ORGLA01G0104900 Oryza glaberrima ORGLA01G0104900 I
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I
ORGLA04G0153500 Oryza glaberrima ORGLA04G0153500 I
ORGLA05G0022200 Oryza glaberrima ORGLA05G0022200 I
ORGLA07G0213800 Oryza glaberrima ORGLA07G0213800 I
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I
ORUFI01G13460 Oryza rufipogon ORUFI01G13460 I
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I
ORUFI04G19690 Oryza rufipogon ORUFI04G19690 I
ORUFI05G02420 Oryza rufipogon ORUFI05G02420 I
ORUFI07G27930 Oryza rufipogon ORUFI07G27930 I
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I
OS01G0128000 Oryza sativa OS01G0128000 I
OS01G0298400 Oryza sativa OS01G0298400 I
OS02G0618400 Oryza sativa OS02G0618400 I
OS03G0142600 Oryza sativa OS03G0142600 I
OS04G0508500 Oryza sativa OS04G0508500 I
OS07G0688200 Oryza sativa OS07G0688200 I
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I
Pavir.Ba00256 Panicum virgatum Pavir.Ba00256 I
Pavir.Ca00769 Panicum virgatum Pavir.Ca00769 I
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Pavir.Ea00660 Panicum virgatum Pavir.Ea00660 I
Pavir.Ea00964 Panicum virgatum Pavir.Ea00964 I
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I
Pavir.Eb01219 Panicum virgatum Pavir.Eb01219 I
Pavir.Ga01308 Panicum virgatum Pavir.Ga01308 I
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I
Pavir.Ib00221 Panicum virgatum Pavir.Ib00221 I
Pavir.J03771 Panicum virgatum Pavir.J03771 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
Pavir.J28445 Panicum virgatum Pavir.J28445 I
Pavir.J37992 Panicum virgatum Pavir.J37992 I
Pavir.J39490 Panicum virgatum Pavir.J39490 I
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I
PK10896.1 Cannabis sativa PK10896.1 I
PK13281.1 Cannabis sativa PK13281.1 I
PK22268.1 Cannabis sativa PK22268.1 I
Pm009050 Prunus mume Pm009050 I
Pm012912 Prunus mume Pm012912 I
Pm015392 Prunus mume Pm015392 I
Pm015692 Prunus mume Pm015692 I
Pm025177 Prunus mume Pm025177 I
Pm027048 Prunus mume Pm027048 I
Pm029082 Prunus mume Pm029082 I
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I
POPTR_0001s35200 Populus trichocarpa POPTR_0001s35200 I
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I
POPTR_0004s11460 Populus trichocarpa POPTR_0004s11460 I
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I
POPTR_0008s12130 Populus trichocarpa POPTR_0008s12130 I
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I
POPTR_0010s13290 Populus trichocarpa POPTR_0010s13290 I
POPTR_0012s05200 Populus trichocarpa POPTR_0012s05200 I
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I
POPTR_0015s03770 Populus trichocarpa POPTR_0015s03770 I
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I
PRUPE_ppa008877mg Prunus persica PRUPE_ppa008877mg I
PRUPE_ppa009143mg Prunus persica PRUPE_ppa009143mg I
PRUPE_ppa011751mg Prunus persica PRUPE_ppa011751mg I
PRUPE_ppa015973mg Prunus persica PRUPE_ppa015973mg I
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I
SapurV1A.0078s0260 Salix purpurea SapurV1A.0078s0260 I
SapurV1A.0079s0020 Salix purpurea SapurV1A.0079s0020 I
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I
SapurV1A.0530s0020 Salix purpurea SapurV1A.0530s0020 I
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I
SapurV1A.0989s0120 Salix purpurea SapurV1A.0989s0120 I
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I
SapurV1A.1621s0010 Salix purpurea SapurV1A.1621s0010 I
SapurV1A.2885s0020 Salix purpurea SapurV1A.2885s0020 I
Sb01g037110 Sorghum bicolor Sb01g037110 I
Sb01g047450 Sorghum bicolor Sb01g047450 I
Sb02g043420 Sorghum bicolor Sb02g043420 I
Sb03g007360 Sorghum bicolor Sb03g007360 I
Sb03g012310 Sorghum bicolor Sb03g012310 I
Sb04g026210 Sorghum bicolor Sb04g026210 I
Sb08g018580 Sorghum bicolor Sb08g018580 I
Sb09g002675 Sorghum bicolor Sb09g002675 I
Sb09g002680 Sorghum bicolor Sb09g002680 I
Si002446m.g Setaria italica Si002446m.g I
Si010822m.g Setaria italica Si010822m.g I
Si018007m.g Setaria italica Si018007m.g I
Si022474m.g Setaria italica Si022474m.g I
Si023104m.g Setaria italica Si023104m.g I
Si030584m.g Setaria italica Si030584m.g I
Si035722m.g Setaria italica Si035722m.g I
Si037281m.g Setaria italica Si037281m.g I
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I
Solyc03g119370.1 Solanum lycopersicum Solyc03g119370.1 I
Solyc05g009230.1 Solanum lycopersicum Solyc05g009230.1 I
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I
TCM_004878 Theobroma cacao TCM_004878 I
TCM_009642 Theobroma cacao TCM_009642 I
TCM_011907 Theobroma cacao TCM_011907 I
TCM_012363 Theobroma cacao TCM_012363 I
TCM_016901 Theobroma cacao TCM_016901 I
TCM_018971 Theobroma cacao TCM_018971 I
TCM_021037 Theobroma cacao TCM_021037 I
TCM_024180 Theobroma cacao TCM_024180 I
TCM_025910 Theobroma cacao TCM_025910 I
TCM_030853 Theobroma cacao TCM_030853 I
TCM_041904 Theobroma cacao TCM_041904 I
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I
Thhalv10008403m.g Eutrema salsugineum Thhalv10008403m.g I
Thhalv10012051m.g Eutrema salsugineum Thhalv10012051m.g I
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
Thhalv10016567m.g Eutrema salsugineum Thhalv10016567m.g I
Thhalv10018962m.g Eutrema salsugineum Thhalv10018962m.g I
Thhalv10021126m.g Eutrema salsugineum Thhalv10021126m.g I
Thhalv10026896m.g Eutrema salsugineum Thhalv10026896m.g I
Thhalv10027930m.g Eutrema salsugineum Thhalv10027930m.g I
TRAES3BF034000040CFD_g Triticum aestivum TRAES3BF034000040CFD_g I
Traes_1AS_36AF74187 Triticum aestivum Traes_1AS_36AF74187 I
Traes_2AL_605C25CDF Triticum aestivum Traes_2AL_605C25CDF I
Traes_2AS_25C93FD29 Triticum aestivum Traes_2AS_25C93FD29 I
Traes_2AS_25C93FD291 Triticum aestivum Traes_2AS_25C93FD291 I
Traes_2BS_E8D2BD66E Triticum aestivum Traes_2BS_E8D2BD66E I
Traes_2DS_61B920833 Triticum aestivum Traes_2DS_61B920833 I
Traes_3AS_5E49D47AF Triticum aestivum Traes_3AS_5E49D47AF I
Traes_3DS_A0676BAEA Triticum aestivum Traes_3DS_A0676BAEA I
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I
Traes_4DL_14C563681 Triticum aestivum Traes_4DL_14C563681 N
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I
TRIUR3_09345 Triticum urartu TRIUR3_09345 I
TRIUR3_16862 Triticum urartu TRIUR3_16862 I
TRIUR3_18020 Triticum urartu TRIUR3_18020 I
TRIUR3_31527 Triticum urartu TRIUR3_31527 I
VIT_01s0011g03730 Vitis vinifera VIT_01s0011g03730 I
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I
VIT_17s0000g03560 Vitis vinifera VIT_17s0000g03560 I