CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000440300
(
Globodera pallida
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
GPLIN_000440300
T234026_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000440300
Homeodomain
246
319
RRERYVFRPVLLRVLEAYFQESAFPDIAKRVEIANACNAHLQMDKRGAQLMPKEVVTPQVIANWFANKRKEMRR
Links
Other
Homeodomain
family TFs
Other
Globodera pallida
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01197
Capronia coronata
A1O1_01197
I
A1O3_08778
Capronia epimyces
A1O3_08778
I
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
AALB006415
Anopheles albimanus
AALB006415
I
AARA010616
Anopheles arabiensis
AARA010616
I
AATE016215
Anopheles atroparvus
AATE016215
I
AB07914.1
Alternaria brassicicola
AB07914.1
I
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
ACUA004409
Anopheles culicifacies
ACUA004409
I
ACYPI005775
Acyrthosiphon pisum
ACYPI005775
I
ADAC003252
Anopheles darlingi
ADAC003252
I
AFAF011136
Anopheles farauti
AFAF011136
I
AGAP000281
Anopheles gambiae
AGAP000281
I
AMEC012857
Anopheles melas
AMEC012857
I
AMEM006878
Anopheles merus
AMEM006878
I
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
ASIS016667
Anopheles sinensis
ASIS016667
I
ASTEI07799
Anopheles stephensi
ASTEI07799
I
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
BBA_01214
Beauveria bassiana
BBA_01214
I
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
BDDG_03827
Blastomyces dermatitidis
BDDG_03827
N
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
BGIBMGA006848
Bombyx mori
BGIBMGA006848
I
CCM_01555
Cordyceps militaris
CCM_01555
I
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
CGI_10017717
Crassostrea gigas
CGI_10017717
I
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
CHGG_01519
Chaetomium globosum
CHGG_01519
I
CLEC001918
Cimex lectularius
CLEC001918
I
CLEC003860
Cimex lectularius
CLEC003860
I
CMQ_8074
Grosmannia clavigera
CMQ_8074
I
COCC4DRAFT_135921
Bipolaris maydis
COCC4DRAFT_135921
I
COCCADRAFT_24603
Bipolaris zeicola
COCCADRAFT_24603
I
COCMIDRAFT_97534
Bipolaris oryzae
COCMIDRAFT_97534
I
COCSADRAFT_180514
Bipolaris sorokiniana
COCSADRAFT_180514
I
COCSADRAFT_226282
Bipolaris sorokiniana
COCSADRAFT_226282
I
COCVIDRAFT_115390
Bipolaris victoriae
COCVIDRAFT_115390
I
COCVIDRAFT_17843
Bipolaris victoriae
COCVIDRAFT_17843
I
CPUR_04901
Claviceps purpurea
CPUR_04901
I
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
D918_09264
Trichuris suis
D918_09264
N
DAPPUDRAFT_19853
Daphnia pulex
DAPPUDRAFT_19853
I
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
E5Q_03709
Mixia osmundae
E5Q_03709
N
EBI_27337
Enterocytozoon bieneusi
EBI_27337
N
EBI_27667
Enterocytozoon bieneusi
EBI_27667
N
EEL_0000223401
Elaeophora elaphi
EEL_0000223401
N
ENSCING00000009516
Ciona intestinalis
ENSCING00000009516
N
ENSCING00000018888
Ciona intestinalis
ENSCING00000018888
N
ENSCSAVG00000009270
Ciona savignyi
ENSCSAVG00000009270
N
ENSGGOG00000025016
Gorilla gorilla
ENSGGOG00000025016
I
ENSGMOG00000008081
Gadus morhua
ENSGMOG00000008081
N
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
ENSGMOG00000015161
Gadus morhua
ENSGMOG00000015161
I
ENSMMUG00000002541
Macaca mulatta
ENSMMUG00000002541
I
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
ENSONIG00000000284
Oreochromis niloticus
ENSONIG00000000284
N
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
ENSPFOG00000008402
Poecilia formosa
ENSPFOG00000008402
N
ENSSSCG00000023554
Sus scrofa
ENSSSCG00000023554
N
ENSTGUG00000003811
Taeniopygia guttata
ENSTGUG00000003811
N
ENSXMAG00000000362
Xiphophorus maculatus
ENSXMAG00000000362
I
ENSXMAG00000016763
Xiphophorus maculatus
ENSXMAG00000016763
N
EPUS_09213
Endocarpon pusillum
EPUS_09213
I
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
Eucgr.I01920
Eucalyptus grandis
Eucgr.I01920
N
EV44_g2383
Erysiphe necator
EV44_g2383
I
e_gw1.30.104.1
Phycomyces blakesleeanus
e_gw1.30.104.1
N
F503_04824
Ophiostoma piceae uamh
F503_04824
I
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
fgenesh1_pm.C_scaffold_14000132
Cochliobolus heterostrophus C5
fgenesh1_pm.C_scaffold_14000132
I
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
G647_10093
Cladophialophora carrionii
G647_10093
I
GB43084
Apis mellifera
GB43084
I
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
gw1.16.190.1
Phycomyces blakesleeanus
gw1.16.190.1
N
gw1.4.435.1
Cryphonectria parasitica
gw1.4.435.1
I
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
H072_9301
Dactylellina haptotyla
H072_9301
N
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
HelroG145107
Helobdella robusta
HelroG145107
N
HHAL000823-PA
Halyomorpha halys
HHAL000823-PA
I
HMEL005034
Heliconius melpomene
HMEL005034
I
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
ISCW015985
Ixodes scapularis
ISCW015985
N
ISCW018867
Ixodes scapularis
ISCW018867
I
KGM_14572
Danaus plexippus
KGM_14572
I
LEMA_P000900.1
Leptosphaeria maculans
LEMA_P000900.1
N
LEMA_P064360.1
Leptosphaeria maculans
LEMA_P064360.1
I
LotgiG109021
Lottia gigantea
LotgiG109021
I
M408DRAFT_328926
Serendipita vermifera
M408DRAFT_328926
I
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
M438DRAFT_338286
Aureobasidium pullulans
M438DRAFT_338286
I
M7I_1578
Glarea lozoyensis
M7I_1578
I
MAJ_04030
Metarhizium majus
MAJ_04030
I
MANI_030028
Metarhizium anisopliae
MANI_030028
I
MAPG_06737
Magnaporthe poae
MAPG_06737
I
MBM_02410
Marssonina brunnea
MBM_02410
I
MBR_01483
Metarhizium brunneum
MBR_01483
I
MCINX005468
Melitaea cinxia
MCINX005468
I
MELLADRAFT_85039
Melampsora laricipopulina
MELLADRAFT_85039
I
mgf024995m
Mimulus guttatus
mgf024995m
I
MGG_01641
Magnaporthe oryzae
MGG_01641
I
MGU_02157
Metarhizium guizhouense
MGU_02157
I
MPH_08050
Macrophomina phaseolina
MPH_08050
I
MVLG_01270
Microbotryum violaceum
MVLG_01270
I
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
NCU02819
Neurospora crassa
NCU02819
D
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
nOo.2.0.1.g12207
Onchocerca ochengi
nOo.2.0.1.g12207
N
NV10488
Nasonia vitripennis
NV10488
I
O9G_002262
Rozella allomycis
O9G_002262
I
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
OFLC_0001222801
Onchocerca flexuosa
OFLC_0001222801
N
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
PAAG_05470
Paracoccidioides sp lutzii
PAAG_05470
N
PABG_05916
Paracoccidioides brasiliensis
PABG_05916
N
PGTG_10028
Puccinia graminis
PGTG_10028
I
PGTG_12120
Puccinia graminis
PGTG_12120
I
PIIN_05794
Piriformospora indica
PIIN_05794
I
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
PTRG_02818
Pyrenophora triticirepentis
PTRG_02818
I
PTT_17082
Pyrenophora teres
PTT_17082
I
PV04_00198
Capronia semiimmersa
PV04_00198
I
PV05_09944
Exophiala xenobiotica
PV05_09944
I
PV06_04154
Exophiala oligosperma
PV06_04154
I
PV07_09313
Cladophialophora immunda
PV07_09313
I
PV08_04655
Exophiala spinifera
PV08_04655
I
PV09_06887
Verruconis gallopava
PV09_06887
I
PV10_01993
Exophiala mesophila
PV10_01993
I
PV11_09703
Exophiala sideris
PV11_09703
I
PVAR5_2976
Byssochlamys spectabilis
PVAR5_2976
N
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
RPRC000650
Rhodnius prolixus
RPRC000650
I
RSKR_0000171200
Rhabditophanes kr3021
RSKR_0000171200
N
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
S40288_09735
Stachybotrys chartarum
S40288_09735
I
Sakowv30024549m.g
Saccoglossus kowalevskii
Sakowv30024549m.g
N
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
SETTUDRAFT_157792
Setosphaeria turcica
SETTUDRAFT_157792
I
SMAC_00615
Sordaria macrospora
SMAC_00615
I
SMU15029818
Schmidtea mediterranea
SMU15029818
I
SNOG_01716
Stagonospora nodorum
SNOG_01716
N
SNOG_03674
Stagonospora nodorum
SNOG_03674
I
SNOG_03674
Phaeosphaeria nodorum
SNOG_03674
I
SPBR_04745
Sporothrix brasiliensis
SPBR_04745
I
SPU_002060
Strongylocentrotus purpuratus
SPU_002060
N
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
TC012723
Tribolium castaneum
TC012723
I
THITE_2121767
Thielavia terrestris
THITE_2121767
I
TMUE_s0009009400
Trichuris muris
TMUE_s0009009400
N
TMUE_s0011001600
Trichuris muris
TMUE_s0011001600
I
tox2
Gasterosteus aculeatus
ENSGACG00000006914
N
tox2
Oryzias latipes
ENSORLG00000004818
N
tox2
Tetraodon nigroviridis
ENSTNIG00000005683
N
tox2
Takifugu rubripes
ENSTRUG00000013848
N
tox4.S
Xenopus laevis
XB-GENE-993810
I
tox4a
Gasterosteus aculeatus
ENSGACG00000014107
I
tox4b
Danio rerio
ENSDARG00000100163
I
tox4b
Oryzias latipes
ENSORLG00000008779
N
tox4b
Tetraodon nigroviridis
ENSTNIG00000003691
N
tox4b
Takifugu rubripes
ENSTRUG00000002594
N
TRIATDRAFT_321166
Trichoderma atroviride
TRIATDRAFT_321166
I
TRIVIDRAFT_228694
Trichoderma virens
TRIVIDRAFT_228694
I
TTHERM_00216040
Tetrahymena thermophila
TTHERM_00216040
N
TTRE_0000108401
Trichuris trichiura
TTRE_0000108401
N
TTRE_0000401801
Trichuris trichiura
TTRE_0000401801
I
UCRNP2_5474
Neofusicoccum parvum
UCRNP2_5474
N
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
VDAG_04140
Verticillium dahliae
VDAG_04140
I
VDAG_09161
Verticillium dahliae
VDAG_09161
I
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
VHEMI10573
Torrubiella hemipterigena
VHEMI10573
I
W97_04202
Coniosporium apollinis
W97_04202
I
W97_04667
Coniosporium apollinis
W97_04667
N
WBGene00236865
Onchocerca volvulus
WBGene00236865
N
X797_001988
Metarhizium robertsii
X797_001988
I
XP_002936155
Xenopus tropicalis
XP_002936155
N
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
Z519_04692
Cladophialophora bantiana
Z519_04692
I