evm.TU.supercontig_228.17 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_228.17 T287103_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.761 0.864
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.718 0.779
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.687 0.736
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_228.17 Myb 59 105
evm.model.supercontig_228.17 Myb 111 157
evm.model.supercontig_228.17 Myb 163 208

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29794.m003447 Ricinus communis 29794.m003447 I 0.661
29846.m000184 Ricinus communis 29846.m000184 I 0.849
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.728
AMTR_s00109p00061950 Amborella trichopoda AMTR_s00109p00061950 I 0.665
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.814
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.761
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.688
Bo1g144510 Brassica oleracea Bo1g144510 I 0.840
Bo3g062020 Brassica oleracea Bo3g062020 N 0.685
Bo5g139340 Brassica oleracea Bo5g139340 I 0.784
Bo9g184660 Brassica oleracea Bo9g184660 I 0.717
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.777
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.779
Bra001311 Brassica rapa Bra001311 N 0.662
Bra009597 Brassica rapa Bra009597 I 0.727
Bra029762 Brassica rapa Bra029762 I 0.783
Bra034067 Brassica rapa Bra034067 I 0.840
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.834
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.779
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.768
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.779
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.768
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.822
Ca_14925 Cicer arietinum Ca_14925 I 0.667
Ca_21127 Cicer arietinum Ca_21127 I 0.680
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.836
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.847
Cla018173 Citrullus lanatus Cla018173 I 0.780
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.802
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.883
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.668
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.668
F775_12121 Aegilops tauschii F775_12121 N 0.676
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.799
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.663
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.763
GLYMA03G19470 Glycine max GLYMA03G19470 I 0.708
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.696
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.696
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.809
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.793
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.844
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.827
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.801
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.849
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.741
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.773
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.838
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.841
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.841
MDP0000179225 Malus domestica MDP0000179225 I 0.671
MDP0000219581 Malus domestica MDP0000219581 I 0.825
MDP0000295807 Malus domestica MDP0000295807 I 0.678
mgf008601m Mimulus guttatus mgf008601m I 0.667
mgf019610m Mimulus guttatus mgf019610m I 0.847
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.684
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.797
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.797
MYB3R-2 Oryza sativa OS01G0841500 I 0.780
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.782
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.761
OB01G45570 Oryza brachyantha OB01G45570 I 0.719
OBART05G19200 Oryza barthii OBART05G19200 I 0.688
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.780
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.713
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.688
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.702
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.847
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.780
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.666
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.688
OS05G0459000 Oryza sativa OS05G0459000 I 0.666
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.804
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.793
PDK_20s1314361g001 Phoenix dactylifera PDK_20s1314361g001 N 0.669
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.751
PK11664.1 Cannabis sativa PK11664.1 I 0.766
PK12011.1 Cannabis sativa PK12011.1 D 0.718
Pm002704 Prunus mume Pm002704 I 0.856
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.841
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.665
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.856
Q948S6_TOBAC Nicotiana tabacum Q948S6_TOBAC D 0.687
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.843
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.807
Si000842m.g Setaria italica Si000842m.g I 0.793
Si021484m.g Setaria italica Si021484m.g I 0.691
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.751
Solyc11g071300.1 Solanum lycopersicum Solyc11g071300.1 I 0.662
TCM_021936 Theobroma cacao TCM_021936 I 0.876
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.776
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.807
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.810
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.727
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.713
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.810
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.810
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.721
TRIUR3_33469 Triticum urartu TRIUR3_33469 N 0.676
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.841