CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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67303
(
Aureococcus anophagefferens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
67303
T333906_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
67303
Sox
1
35
MAADWNALDAKGKEEYVQLAEDDKARYTRELEEYK
Links
Other
Sox
family TFs
Other
Aureococcus anophagefferens
TFs
206 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
68433
Aureococcus anophagefferens
68433
N
0.496
AAEL000771
Aedes aegypti
AAEL000771
N
0.559
AALB009772
Anopheles albimanus
AALB009772
N
0.483
AALB009867
Anopheles albimanus
AALB009867
N
0.590
Aan_R006397
Calypte anna
Aan_R006397
N
0.526
AATE015714
Anopheles atroparvus
AATE015714
N
0.483
AATE016483
Anopheles atroparvus
AATE016483
N
0.548
ACEP25851
Atta cephalotes
ACEP25851
N
0.483
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.590
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.483
ACUA008827
Anopheles culicifacies
ACUA008827
N
0.548
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.590
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.559
ADIR005631
Anopheles dirus
ADIR005631
N
0.514
ADIR009661
Anopheles dirus
ADIR009661
N
0.483
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.590
AEPI007652
Anopheles epiroticus
AEPI007652
N
0.548
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.559
Afo_R011382
Aptenodytes forsteri
Afo_R011382
N
0.450
Afo_R012388
Aptenodytes forsteri
Afo_R012388
N
0.548
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.500
AFUN006689
Anopheles funestus
AFUN006689
N
0.548
AFUN009317
Anopheles funestus
AFUN009317
N
0.559
AFUN010198
Anopheles funestus
AFUN010198
N
0.590
AGAP028091
Anopheles gambiae
AGAP028091
N
0.559
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.590
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.597
AMAM004028
Anopheles maculatus
AMAM004028
N
0.548
AMAM023617
Anopheles maculatus
AMAM023617
N
0.559
AMEC007393
Anopheles melas
AMEC007393
N
0.548
AMEC011653
Anopheles melas
AMEC011653
N
0.559
AMEM002834
Anopheles merus
AMEM002834
N
0.559
AMEM007694
Anopheles merus
AMEM007694
N
0.496
AMIN001220
Anopheles minimus
AMIN001220
N
0.548
AMIN009302
Anopheles minimus
AMIN009302
N
0.590
ANCCEY_05358
Ancylostoma ceylanicum
ANCCEY_05358
N
0.480
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.661
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.590
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.483
ASIM_0000075001
Anisakis simplex
ASIM_0000075001
N
0.440
ASIS001889
Anopheles sinensis
ASIS001889
N
0.465
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.559
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.514
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.422
BBX
Sorex araneus
ENSSARG00000008353
N
0.477
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.590
BGLB010902
Biomphalaria glabrata
BGLB010902
N
0.472
Brh_R007868
Buceros rhinoceros
Brh_R007868
N
0.450
CaO19.1731
Candida albicans
CaO19.1731
N
0.422
CaO19.400
Candida albicans
CaO19.400
N
0.451
CaO19.8030
Candida albicans
CaO19.8030
N
0.451
CaO19.9299
Candida albicans
CaO19.9299
N
0.422
CBN19486
Caenorhabditis brenneri
CBN19486
N
0.429
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.469
Cla016375
Citrullus lanatus
Cla016375
N
0.591
CLEC006960
Cimex lectularius
CLEC006960
N
0.590
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.465
Cmyd_10006594
Chelonia mydas
Cmyd_10006594
N
0.548
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.590
CPIJ012498
Culex quinquefasciatus
CPIJ012498
N
0.465
CPIJ014017
Culex quinquefasciatus
CPIJ014017
N
0.548
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.590
CpipJ_CPIJ012498
Culex pipiens
CpipJ_CPIJ012498
N
0.465
CpipJ_CPIJ014017
Culex pipiens
CpipJ_CPIJ014017
N
0.548
DAPPUDRAFT_113704
Daphnia pulex
DAPPUDRAFT_113704
N
0.550
DAPPUDRAFT_259784
Daphnia pulex
DAPPUDRAFT_259784
N
0.451
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.659
DICVIV_04576
Dictyocaulus viviparus
DICVIV_04576
N
0.427
DILT_0001419401
Diphyllobothrium latum
DILT_0001419401
N
0.506
ECPE_0001383301
Echinostoma caproni
ECPE_0001383301
N
0.535
EDI_065970
Entamoeba dispar
EDI_065970
N
0.448
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.550
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.594
ENSAPLG00000003216
Anas platyrhynchos
ENSAPLG00000003216
N
0.548
ENSAPLG00000008530
Anas platyrhynchos
ENSAPLG00000008530
N
0.450
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.594
ENSAPLG00000013168
Anas platyrhynchos
ENSAPLG00000013168
I
0.548
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.594
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.603
ENSFALG00000011068
Ficedula albicollis
ENSFALG00000011068
N
0.523
ENSFCAG00000015685
Felis catus
ENSFCAG00000015685
I
0.548
ENSGALG00000023601
Gallus gallus
ENSGALG00000023601
N
0.450
ENSMGAG00000006336
Meleagris gallopavo
ENSMGAG00000006336
N
0.450
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.594
ENSNLEG00000002693
Nomascus leucogenys
ENSNLEG00000002693
N
0.573
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.496
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.590
ENSP00000409273
Macaca fascicularis
ENSP00000409273
I
0.548
ENSPCAG00000014137
Procavia capensis
ENSPCAG00000014137
N
0.466
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.498
ENSPSIG00000016857
Pelodiscus sinensis
ENSPSIG00000016857
N
0.523
ENSSHAG00000008406
Sarcophilus harrisii
ENSSHAG00000008406
I
0.548
ENSTSYG00000001164
Tarsius syrichta
ENSTSYG00000001164
I
0.543
ENSTSYG00000006321
Tarsius syrichta
ENSTSYG00000006321
I
0.548
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.594
ENSVPAG00000008729
Vicugna pacos
ENSVPAG00000008729
N
0.520
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.646
estExt_Genewise1.C_sca_3_chr4_2_00418
Nectria haematococca
estExt_Genewise1.C_sca_3_chr4_2_00418
N
0.437
F443_09320
Phytophthora parasitica
F443_09320
N
0.562
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.451
fgenesh1_pg.sca_3_chr4_2_0000426
Nectria haematococca
fgenesh1_pg.sca_3_chr4_2_0000426
N
0.453
fgenesh1_pm.C_scaffold_23000166
Phytophthora capsici
fgenesh1_pm.C_scaffold_23000166
N
0.561
fgenesh_scip_prom.28083.3150
Phytophthora lateralis
fgenesh_scip_prom.28083.3150
N
0.561
Gfo_R008143
Geospiza fortis
Gfo_R008143
N
0.523
GLOINDRAFT_271935
Rhizophagus irregularis
GLOINDRAFT_271935
N
0.510
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.567
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.428
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.435
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.504
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.561
GPUH_0000499601
Gongylonema pulchrum
GPUH_0000499601
N
0.503
HelroG167700
Helobdella robusta
HelroG167700
N
0.441
HelroG68905
Helobdella robusta
HelroG68905
N
0.492
HHAL000218-PA
Halyomorpha halys
HHAL000218-PA
N
0.556
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.483
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.460
HMEL013676
Heliconius melpomene
HMEL013676
N
0.559
HMG20A
Pteropus vampyrus
ENSPVAG00000003321
N
0.469
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.610
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.635
Hsal_05005--XP_001122373.1_APIME
Harpegnathos saltator
Hsal_05005--XP_001122373.1_APIME
N
0.422
ISCW001638
Ixodes scapularis
ISCW001638
N
0.556
JL09_g5343
Pichia kudriavzevii
JL09_g5343
N
0.622
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.435
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.573
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.479
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.590
L898_g4879
Steinernema monticolum
L898_g4879
N
0.543
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.435
LbrM.21.1660
Leishmania braziliensis
LbrM.21.1660
N
0.436
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.590
LDEC018263
Leptinotarsa decemlineata
LDEC018263
N
0.559
LEF1
Tursiops truncatus
ENSTTRG00000008109
N
0.484
LotgiG143673
Lottia gigantea
LotgiG143673
N
0.556
M404DRAFT_787968
Pisolithus tinctorius
M404DRAFT_787968
N
0.494
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.485
M7I_1506
Glarea lozoyensis
M7I_1506
N
0.486
MELLADRAFT_86211
Melampsora laricipopulina
MELLADRAFT_86211
N
0.419
MESCA006364
Megaselia scalaris
MESCA006364
N
0.479
MESCA012239
Megaselia scalaris
MESCA012239
I
0.434
Minc18937
Meloidogyne incognita
Minc18937
N
0.636
MPER_06248
Moniliophthora perniciosa
MPER_06248
N
0.564
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.592
Myotis_brandtii_TFAM_10031378
Myotis brandtii
Myotis_brandtii_TFAM_10031378
N
0.516
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.594
NechaG59892
Fusarium solani
NechaG59892
N
0.437
NechaG79025
Fusarium solani
NechaG79025
N
0.453
OESDEN_13669
Oesophagostomum dentatum
OESDEN_13669
N
0.438
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.654
Ogr00751
Ophisaurus gracilis
Ogr00751
I
0.548
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.603
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.498
PEQ_0000549401
Parascaris equorum
PEQ_0000549401
N
0.550
PHUM433280
Pediculus humanus
PHUM433280
N
0.559
Phyra76615
Phytophthora ramorum
Phyra76615
N
0.561
Physo127875
Phytophthora sojae
Physo127875
N
0.561
PK00252.1
Cannabis sativa
PK00252.1
N
0.552
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.443
PPA11045
Pristionchus pacificus
PPA11045
N
0.419
PPAI005428
Phlebotomus papatasi
PPAI005428
N
0.455
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.569
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.569
PV06_10806
Exophiala oligosperma
PV06_10806
N
0.446
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.450
SapurV1A.0237s0190
Salix purpurea
SapurV1A.0237s0190
N
0.490
SCLCIDRAFT_59496
Scleroderma citrinum
SCLCIDRAFT_59496
N
0.435
SINV16572
Solenopsis invicta
SINV16572
N
0.559
SINV19749
Solenopsis invicta
SINV19749
N
0.514
SMAR007058
Strigamia maritima
SMAR007058
N
0.550
SMAR010125
Strigamia maritima
SMAR010125
N
0.465
SOX10
Echinops telfairi
ENSETEG00000012633
I
0.548
Sox17
Mus musculus
ENSMUSG00000025902
D
0.594
SOX17
Sorex araneus
ENSSARG00000009573
I
0.594
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.603
SOX18
Echinops telfairi
ENSETEG00000001816
N
0.466
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.603
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.603
SOX2
Felis catus
ENSFCAG00000029205
I
0.514
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.514
Sox6
Dipodomys ordii
ENSDORG00000013073
N
0.520
SOX8
Callithrix jacchus
ENSCJAG00000002684
I
0.548
SOX8
Echinops telfairi
ENSETEG00000015470
N
0.548
SOX8
Felis catus
ENSFCAG00000004219
N
0.548
SOX8
Microcebus murinus
ENSMICG00000011516
I
0.548
SOX9
Echinops telfairi
ENSETEG00000020237
I
0.548
SOX9
Myotis lucifugus
ENSMLUG00000030312
I
0.548
SOX9
Ochotona princeps
ENSOPRG00000007860
N
0.439
SOX9
Tupaia belangeri
ENSTBEG00000000175
N
0.548
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.548
TC009856
Tribolium castaneum
TC009856
N
0.559
TCF7L2
Vicugna pacos
ENSVPAG00000008158
N
0.445
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.530
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.553
TTAC_0000824601
Hydatigera taeniaeformis
TTAC_0000824601
N
0.435
TVAG_114290
Trichomonas vaginalis
TVAG_114290
N
0.485
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.479
UCREL1_237
Eutypa lata
UCREL1_237
N
0.493
VDBG_04936
Verticillium albo atrum
VDBG_04936
N
0.441
VDBG_04936
Verticillium alfalfae
VDBG_04936
N
0.441
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.452
WUBG_10398
Wuchereria bancrofti
WUBG_10398
N
0.463
WUBG_12101
Wuchereria bancrofti
WUBG_12101
N
0.587
yakG000714
Bos grunniens
yakG000714
N
0.511
YQE_03817
Dendroctonus ponderosae
YQE_03817
N
0.559
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.486
YQE_13041
Dendroctonus ponderosae
YQE_13041
N
0.465